zeb1b (Takifugu rubripes)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSTRUG00000001422 T076032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.820 0.820
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.820 0.820
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.820 0.820
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.820 0.820
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.820 0.820
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.820 0.820
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.820 0.820
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.820 0.820
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.820 0.820
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.820 0.820
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.820 0.820
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.816 0.816
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.816 0.816
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000003271 C2H2 ZF 59 82
ENSTRUP00000003271 C2H2 ZF 89 111
ENSTRUP00000003271 C2H2 ZF 129 151
ENSTRUP00000003271 C2H2 ZF 157 178
ENSTRUP00000003271 Homeodomain 467 514
ENSTRUP00000003271 C2H2 ZF 754 776
ENSTRUP00000003271 C2H2 ZF 782 804
ENSTRUP00000003271 C2H2 ZF 810 831
ENSTRUP00000003272 C2H2 ZF 65 88
ENSTRUP00000003272 C2H2 ZF 95 117
ENSTRUP00000003272 C2H2 ZF 135 157
ENSTRUP00000003272 C2H2 ZF 163 184
ENSTRUP00000003272 Homeodomain 473 520
ENSTRUP00000003272 C2H2 ZF 760 782
ENSTRUP00000003272 C2H2 ZF 788 810
ENSTRUP00000003272 C2H2 ZF 816 837
ENSTRUP00000003273 C2H2 ZF 65 88
ENSTRUP00000003273 C2H2 ZF 95 117
ENSTRUP00000003273 C2H2 ZF 135 157
ENSTRUP00000003273 C2H2 ZF 163 184
ENSTRUP00000003273 Homeodomain 473 520
ENSTRUP00000003273 C2H2 ZF 760 782
ENSTRUP00000003273 C2H2 ZF 788 810
ENSTRUP00000003273 C2H2 ZF 816 837

Links

Other C2H2 ZF,Homeodomain family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action