CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ZEB1
(
Tursiops truncatus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSTTRG00000011798
T076045_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.774
0.774
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.774
0.774
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.774
0.774
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.774
0.774
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.774
0.774
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.774
0.774
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.774
0.774
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.774
0.774
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.774
0.774
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.774
0.774
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.774
0.774
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.764
0.764
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.764
0.764
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000011188
C2H2 ZF
171
194
LTCPYCDRGYKRFTSLKEHIKYRH
ENSTTRP00000011188
C2H2 ZF
201
223
FSCSLCSYTFAYRTQLERHMTSH
ENSTTRP00000011188
C2H2 ZF
241
263
FKCTECGKAFKYKHHLKEHLRIH
ENSTTRP00000011188
C2H2 ZF
269
290
YECPNCKKRFSHSGSYSSHISS
ENSTTRP00000011188
Homeodomain
587
634
QPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPPDVVKKWFEKMQ
ENSTTRP00000011188
C2H2 ZF
905
927
YACDLCDKIFQKSSSLLRHKYEH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Tursiops truncatus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000013971
Ovis aries
ENSOARG00000013971
I
0.994
ZEB1
Oryctolagus cuniculus
ENSOCUG00000006516
I
0.988
ZEB1
Erinaceus europaeus
ENSEEUG00000006386
I
0.969
ZEB1
Myotis lucifugus
ENSMLUG00000010631
I
0.875
ZEB1
Gorilla gorilla
ENSGGOG00000010090
I
0.870
ZEB1
Loxodonta africana
ENSLAFG00000009663
I
0.870
ZEB1
Cavia porcellus
ENSCPOG00000007682
I
0.866
ZEB1
Callithrix jacchus
ENSCJAG00000013332
I
0.852
ENSOARG00000009880
Ovis aries
ENSOARG00000009880
I
0.815
Zeb2
Rattus norvegicus
ENSRNOG00000004677
I
0.815
ZEB2
Sorex araneus
ENSSARG00000006858
I
0.815
ENSMEUG00000008997
Macropus eugenii
ENSMEUG00000008997
I
0.815
ENSTSYG00000009177
Tarsius syrichta
ENSTSYG00000009177
I
0.784
Myotis_brandtii_ZEB1_10033015
Myotis brandtii
Myotis_brandtii_ZEB1_10033015
I
0.778
ENSPANG00000022899
Papio anubis
ENSPANG00000022899
I
0.774
ZEB1
Otolemur garnettii
ENSOGAG00000008365
I
0.774
ZEB1
Pteropus vampyrus
ENSPVAG00000010088
I
0.774
Alligator_sinensis_CCG010397.1
Alligator sinensis
Alligator_sinensis_CCG010397.1
I
0.774
Cmyd_10008652
Chelonia mydas
Cmyd_10008652
I
0.774
ENSP00000319248
Macaca fascicularis
ENSP00000319248
I
0.774
ENSSTOG00000016404
Ictidomys tridecemlineatus
ENSSTOG00000016404
I
0.774
ENSMPUG00000013033
Mustela putorius furo
ENSMPUG00000013033
I
0.774
ENSPSIG00000009469
Pelodiscus sinensis
ENSPSIG00000009469
I
0.774
ZEB1
Pan troglodytes
ENSPTRG00000002404
I
0.774
ENSPPYG00000002189
Pongo abelii
ENSPPYG00000002189
I
0.774
ENSNLEG00000018130
Nomascus leucogenys
ENSNLEG00000018130
I
0.774
ZEB1
Dasypus novemcinctus
ENSDNOG00000016748
I
0.774
Zeb1
Dipodomys ordii
ENSDORG00000007230
I
0.774
ZEB1
Homo sapiens
ENSG00000148516
D
0.774
ENSCSAG00000011628
Chlorocebus sabaeus
ENSCSAG00000011628
I
0.774
ZEB1
Canis familiaris
ENSCAFG00000004023
I
0.774
ENSAMEG00000010224
Ailuropoda melanoleuca
ENSAMEG00000010224
I
0.774
ZEB1
Bos taurus
ENSBTAG00000020053
I
0.774
ZEB1
Macaca mulatta
ENSMMUG00000015453
I
0.774
ZEB1
Felis catus
ENSFCAG00000010440
I
0.774
ZEB1
Sorex araneus
ENSSARG00000010985
I
0.770
ZEB1
Monodelphis domestica
ENSMODG00000007847
I
0.770
Afo_R009258
Aptenodytes forsteri
Afo_R009258
I
0.769
ENSAPLG00000007482
Anas platyrhynchos
ENSAPLG00000007482
I
0.769
Gfo_R014876
Geospiza fortis
Gfo_R014876
I
0.769
Tal_R009077
Tyto alba
Tal_R009077
I
0.769
ENSFALG00000007118
Ficedula albicollis
ENSFALG00000007118
I
0.769
Aan_R013683
Calypte anna
Aan_R013683
I
0.769
ZEB1
Gallus gallus
ENSGALG00000007260
I
0.769
ENSLACG00000013253
Latimeria chalumnae
ENSLACG00000013253
I
0.769
ZEB1
Meleagris gallopavo
ENSMGAG00000006355
I
0.768
Zeb1
Mus musculus
ENSMUSG00000024238
D
0.764
Zeb1
Rattus norvegicus
ENSRNOG00000017863
I
0.764
ENSSHAG00000005352
Sarcophilus harrisii
ENSSHAG00000005352
I
0.761
ZEB1
Taeniopygia guttata
ENSTGUG00000001020
I
0.760
ZEB1
Anolis carolinensis
ENSACAG00000007353
I
0.755
zeb1
Xenopus tropicalis
XB-GENE-484655
I
0.752
zeb1.S
Xenopus laevis
XB-GENE-865109
I
0.748
ABC48601
Xenopus laevis
ABC48601
I
0.748
ENSLOCG00000007239
Lepisosteus oculatus
ENSLOCG00000007239
I
0.739
zeb1b
Danio rerio
ENSDARG00000013207
I
0.704