ENSXMAG00000005475 (Xiphophorus maculatus)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSXMAG00000005475 T076049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN

NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.864 0.864
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG

CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.864 0.864
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG

CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.864 0.864
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.864 0.864
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY

RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.864 0.864
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN

NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.864 0.864
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV

BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.864 0.864
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB

VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.864 0.864
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV

BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.864 0.864
ZEB1
M10094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.864 0.864
ZEB1
M10095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.864 0.864
Zeb1
M05844_2.00
Mus musculus
NYACCTGN

NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.859 0.859
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.859 0.859
ZEB2
M10096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.811 0.811
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000005492 C2H2 ZF 130 153
ENSXMAP00000005492 C2H2 ZF 160 182
ENSXMAP00000005492 C2H2 ZF 200 222
ENSXMAP00000005492 C2H2 ZF 228 249
ENSXMAP00000005492 Homeodomain 535 581
ENSXMAP00000005492 C2H2 ZF 825 847
ENSXMAP00000005492 C2H2 ZF 853 875
ENSXMAP00000005492 C2H2 ZF 881 902

Links

Other C2H2 ZF,Homeodomain family TFs
Other Xiphophorus maculatus TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003058 Calypte anna Aan_R003058 I 0.806
Aan_R013683 Calypte anna Aan_R013683 I 0.859
ABC48601 Xenopus laevis ABC48601 I 0.864
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.806
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.859
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.856
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.811
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.806
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.856
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.799
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.811
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.856
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.748
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.859
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.811
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.811
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.856
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.811
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.851
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.806
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.811
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.791
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.856
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.879
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.811
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.856
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.811
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.856
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.951
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.804
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.856
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.811
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.811
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.856
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.981
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.804
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.804
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.786
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.856
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.811
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.856
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.811
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.847
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.811
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.811
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.856
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.761
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.804
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.806
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.851
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.864
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.811
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.806
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.806
Tal_R009077 Tyto alba Tal_R009077 I 0.859
XP_002936763 Xenopus tropicalis XP_002936763 I 0.811
XP_002936766 Xenopus tropicalis XP_002936766 I 0.811
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.859
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.864
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.841
ZEB1 Homo sapiens ENSG00000148516 D 0.856
ZEB1 Sorex araneus ENSSARG00000010985 I 0.864
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.856
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.856
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.856
ZEB1 Bos taurus ENSBTAG00000020053 I 0.856
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.856
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.856
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.743
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.854
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.855
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.856
ZEB1 Felis catus ENSFCAG00000010440 I 0.856
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.856
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.864
Zeb1 Mus musculus ENSMUSG00000024238 D 0.859
ZEB1 Gallus gallus ENSGALG00000007260 I 0.859
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.856
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.743
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.856
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.859
zeb1.S Xenopus laevis XB-GENE-865109 I 0.850
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.813
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.791
zeb1a Danio rerio ENSDARG00000016788 I 0.723
zeb1b Danio rerio ENSDARG00000013207 I 0.879
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.917
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.859
zeb1b Oryzias latipes ENSORLG00000004296 I 0.937
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.811
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.811
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.806
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.811
ZEB2 Bos taurus ENSBTAG00000012615 I 0.811
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.811
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.811
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.811
ZEB2 Equus caballus ENSECAG00000019355 I 0.811
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.806
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.811
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.811
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.811
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.811
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.714
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.811
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.811
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.811
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.811
ZEB2 Felis catus ENSFCAG00000015532 I 0.811
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.811
ZEB2 Homo sapiens ENSG00000169554 D 0.811
Zeb2 Mus musculus ENSMUSG00000026872 I 0.811
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.811
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.811
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.811
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.811
zeb2.S Xenopus laevis XB-GENE-865280 I 0.811