CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPU_022242
(
Strongylocentrotus purpuratus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
SPU_022242
T076179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_022242-tr
C2H2 ZF
301
323
DCPYCDRSYKRLTSLKEHIKYRH
SPU_022242-tr
C2H2 ZF
330
352
FSCPECNYCFAYKSQLERHMATH
SPU_022242-tr
C2H2 ZF
359
380
ICDICNKAFVNIYRLQRHMLTH
SPU_022242-tr
C2H2 ZF
387
409
FKCGECGKAFKYKHHLKEHLRIH
SPU_022242-tr
C2H2 ZF
415
436
YECPTCLKRFSHSGSYSSHISS
SPU_022242-tr
C2H2 ZF
670
689
CKYCGREFHSPIDLHQHERY
SPU_022242-tr
Homeodomain
798
851
KLLETISKAQEQALRAFYAMQAKPSEDGIEKISVALNLPMQLVNKWFQRTRKLE
SPU_022242-tr
C2H2 ZF
1223
1245
YACSQCPKTFQKHSSLLRHVYEH
SPU_022242-tr
C2H2 ZF
1251
1273
HQCKECGKAFKHKHHLMEHSRLH
SPU_022242-tr
C2H2 ZF
1279
1300
YQCDRCLKKFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Strongylocentrotus purpuratus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30038766m.g
Saccoglossus kowalevskii
Sakowv30038766m.g
N
0.791
fgenesh2_pg.scaffold_470000027
Branchiostoma floridae
fgenesh2_pg.scaffold_470000027
N
0.719
fgenesh2_pg.scaffold_137000034
Branchiostoma floridae
fgenesh2_pg.scaffold_137000034
N
0.719