Afo_R000542 (Aptenodytes forsteri)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Afo_R000542 T076216_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZEB2
M10096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.995 0.995
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN

NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.824 0.824
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG

CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.824 0.824
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG

CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.824 0.824
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.824 0.824
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY

RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.824 0.824
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN

NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.824 0.824
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV

BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.824 0.824
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB

VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.824 0.824
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV

BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.824 0.824
ZEB1
M10094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.824 0.824
ZEB1
M10095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.824 0.824
Zeb1
M05844_2.00
Mus musculus
NYACCTGN

NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.819 0.819
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.819 0.819
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R000542 C2H2 ZF 187 210
Afo_R000542 C2H2 ZF 217 239
Afo_R000542 C2H2 ZF 258 280
Afo_R000542 C2H2 ZF 286 307
Afo_R000542 Homeodomain 624 674
Afo_R000542 C2H2 ZF 975 997
Afo_R000542 C2H2 ZF 1003 1025
Afo_R000542 C2H2 ZF 1031 1052

Links

Other C2H2 ZF,Homeodomain family TFs
Other Aptenodytes forsteri TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 1.000
Aan_R003058 Calypte anna Aan_R003058 I 1.000
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 1.000
Gfo_R001123 Geospiza fortis Gfo_R001123 I 1.000
Brh_R003547 Buceros rhinoceros Brh_R003547 I 1.000
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.995
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.995
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.995
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.995
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.995
Zeb2 Mus musculus ENSMUSG00000026872 I 0.995
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.995
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.995
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.995
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.995
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.995
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.995
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.995
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.995
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.995
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.995
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.995
XP_002936763 Xenopus tropicalis XP_002936763 I 0.995
XP_002936766 Xenopus tropicalis XP_002936766 I 0.995
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.995
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.995
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.995
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.995
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.995
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.995
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.995
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.995
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.995
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.995
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.995
ZEB2 Homo sapiens ENSG00000169554 D 0.995
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.995
ZEB2 Equus caballus ENSECAG00000019355 I 0.995
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.995
ZEB2 Bos taurus ENSBTAG00000012615 I 0.995
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.995
ZEB2 Felis catus ENSFCAG00000015532 I 0.995
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.995
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.995
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.995
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.986
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.986
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.986
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.986
zeb2.S Xenopus laevis XB-GENE-865280 I 0.986
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.981
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.895
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.867
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.854
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.837
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.833
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.832
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.832
ZEB1 Felis catus ENSFCAG00000010440 I 0.832
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.832
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.832
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.832
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.832
ZEB1 Bos taurus ENSBTAG00000020053 I 0.832
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.832
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.832
ZEB1 Homo sapiens ENSG00000148516 D 0.832
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.832
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.832
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.832
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.832
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.832
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.832
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.832
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.832
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.832
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.832
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.832
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.832
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.831
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.831
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.828
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.827
Tal_R009077 Tyto alba Tal_R009077 I 0.827
Aan_R013683 Calypte anna Aan_R013683 I 0.827
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.827
ZEB1 Gallus gallus ENSGALG00000007260 I 0.827
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.827
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.827
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.826
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.824
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.824
ZEB1 Sorex araneus ENSSARG00000010985 I 0.824
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.822
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.822
Zeb1 Mus musculus ENSMUSG00000024238 D 0.819
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.817
zeb1b Oryzias latipes ENSORLG00000004296 I 0.816
zeb1b Danio rerio ENSDARG00000013207 I 0.814
ABC48601 Xenopus laevis ABC48601 I 0.811
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.810
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.806
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.803
zeb1.S Xenopus laevis XB-GENE-865109 I 0.800
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.790
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.783
Tal_R007044 Tyto alba Tal_R007044 I 0.781
ZEB2 Sorex araneus ENSSARG00000006858 I 0.781
ENSMEUG00000008997 Macropus eugenii ENSMEUG00000008997 I 0.781
ZEB2 Tupaia belangeri ENSTBEG00000013983 I 0.781
ENSOARG00000009880 Ovis aries ENSOARG00000009880 I 0.781
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.775
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.775
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.775
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.765
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.762
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.762
ENSTSYG00000009434 Tarsius syrichta ENSTSYG00000009434 I 0.743
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.743
ZEB2 Procavia capensis ENSPCAG00000014674 I 0.743
XP_002936765 Xenopus tropicalis XP_002936765 I 0.738
zeb1a Danio rerio ENSDARG00000016788 I 0.725
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.724
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.705
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.705