CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R000542
(
Aptenodytes forsteri
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Afo_R000542
T076216_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB2
M10096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.995
0.995
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.824
0.824
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.824
0.824
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.824
0.824
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.824
0.824
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.824
0.824
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.824
0.824
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.824
0.824
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.824
0.824
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.824
0.824
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.824
0.824
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.824
0.824
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.819
0.819
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.819
0.819
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R000542
C2H2 ZF
187
210
LTCPYCDRGYKRLTSLKEHIKYRH
Afo_R000542
C2H2 ZF
217
239
FSCPLCNYTFAYRTQLERHMVTH
Afo_R000542
C2H2 ZF
258
280
FKCTECGKAFKYKHHLKEHLRIH
Afo_R000542
C2H2 ZF
286
307
YECPNCKKRFSHSGSYSSHISS
Afo_R000542
Homeodomain
624
674
INPYKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQRKVYQ
Afo_R000542
C2H2 ZF
975
997
YACDLCDKTFQKSSSLLRHKYEH
Afo_R000542
C2H2 ZF
1003
1025
HQCQICKKAFKHKHHLIEHSRLH
Afo_R000542
C2H2 ZF
1031
1052
YQCDKCGKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Aptenodytes forsteri
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSFALG00000013846
Ficedula albicollis
ENSFALG00000013846
I
1.000
Aan_R003058
Calypte anna
Aan_R003058
I
1.000
ZEB2
Taeniopygia guttata
ENSTGUG00000011904
I
1.000
Gfo_R001123
Geospiza fortis
Gfo_R001123
I
1.000
Brh_R003547
Buceros rhinoceros
Brh_R003547
I
1.000
ENSNLEG00000009020
Nomascus leucogenys
ENSNLEG00000009020
I
0.995
ZEB2
Gorilla gorilla
ENSGGOG00000003186
I
0.995
ZEB2
Oryctolagus cuniculus
ENSOCUG00000027880
I
0.995
ZEB2
Otolemur garnettii
ENSOGAG00000010020
I
0.995
ENSPANG00000008399
Papio anubis
ENSPANG00000008399
I
0.995
Zeb2
Mus musculus
ENSMUSG00000026872
I
0.995
ENSMPUG00000003620
Mustela putorius furo
ENSMPUG00000003620
I
0.995
ZEB2
Monodelphis domestica
ENSMODG00000003112
I
0.995
ZEB2
Macaca mulatta
ENSMMUG00000016845
I
0.995
ENSPPYG00000012831
Pongo abelii
ENSPPYG00000012831
I
0.995
ZEB2
Meleagris gallopavo
ENSMGAG00000012628
I
0.995
ZEB2
Loxodonta africana
ENSLAFG00000008960
I
0.995
ZEB2
Myotis lucifugus
ENSMLUG00000002019
I
0.995
ENSSHAG00000016692
Sarcophilus harrisii
ENSSHAG00000016692
I
0.995
Myotis_brandtii_ZEB2_10007070
Myotis brandtii
Myotis_brandtii_ZEB2_10007070
I
0.995
ENSP00000386854
Macaca fascicularis
ENSP00000386854
I
0.995
zeb2
Xenopus tropicalis
XB-GENE-479558
I
0.995
XP_002936763
Xenopus tropicalis
XP_002936763
I
0.995
XP_002936766
Xenopus tropicalis
XP_002936766
I
0.995
ENSBTAP00000053646-D1
Bos grunniens
ENSBTAP00000053646-D1
I
0.995
Alligator_sinensis_CCG017701.1
Alligator sinensis
Alligator_sinensis_CCG017701.1
I
0.995
ENSGALG00000012440
Gallus gallus
ENSGALG00000012440
I
0.995
Zeb2
Rattus norvegicus
ENSRNOG00000004677
I
0.995
ENSSTOG00000003811
Ictidomys tridecemlineatus
ENSSTOG00000003811
I
0.995
ZEB2
Tursiops truncatus
ENSTTRG00000006478
I
0.995
ZEB2
Vicugna pacos
ENSVPAG00000002128
I
0.995
ZEB2
Pan troglodytes
ENSPTRG00000012513
I
0.995
ZEB2
Ochotona princeps
ENSOPRG00000006205
I
0.995
ENSCSAG00000016197
Chlorocebus sabaeus
ENSCSAG00000016197
I
0.995
ZEB2
Cavia porcellus
ENSCPOG00000004182
I
0.995
ZEB2
Homo sapiens
ENSG00000169554
D
0.995
ZEB2
Dasypus novemcinctus
ENSDNOG00000039558
I
0.995
ZEB2
Equus caballus
ENSECAG00000019355
I
0.995
ENSAPLG00000007687
Anas platyrhynchos
ENSAPLG00000007687
I
0.995
ZEB2
Bos taurus
ENSBTAG00000012615
I
0.995
ZEB2
Canis familiaris
ENSCAFG00000005497
I
0.995
ZEB2
Felis catus
ENSFCAG00000015532
I
0.995
ZEB2
Choloepus hoffmanni
ENSCHOG00000001435
I
0.995
ZEB2
Callithrix jacchus
ENSCJAG00000012457
I
0.995
ENSAMEG00000009337
Ailuropoda melanoleuca
ENSAMEG00000009337
I
0.995
Ogr14261
Ophisaurus gracilis
Ogr14261
I
0.986
Cmyd_10013008
Chelonia mydas
Cmyd_10013008
I
0.986
Pvit_13221
Pogona vitticeps
Pvit_13221
I
0.986
ZEB2
Anolis carolinensis
ENSACAG00000023811
I
0.986
zeb2.S
Xenopus laevis
XB-GENE-865280
I
0.986
ENSPSIG00000016788
Pelodiscus sinensis
ENSPSIG00000016788
I
0.981
ENSGMOG00000010266
Gadus morhua
ENSGMOG00000010266
I
0.895
ENSPFOG00000016296
Poecilia formosa
ENSPFOG00000016296
I
0.867
ENSXMAG00000002123
Xiphophorus maculatus
ENSXMAG00000002123
I
0.854
ENSLACG00000013253
Latimeria chalumnae
ENSLACG00000013253
I
0.837
ENSSHAG00000005352
Sarcophilus harrisii
ENSSHAG00000005352
I
0.833
ENSPPYG00000002189
Pongo abelii
ENSPPYG00000002189
I
0.832
ENSCSAG00000011628
Chlorocebus sabaeus
ENSCSAG00000011628
I
0.832
ZEB1
Felis catus
ENSFCAG00000010440
I
0.832
ENSPSIG00000009469
Pelodiscus sinensis
ENSPSIG00000009469
I
0.832
ZEB1
Pteropus vampyrus
ENSPVAG00000010088
I
0.832
ZEB1
Callithrix jacchus
ENSCJAG00000013332
I
0.832
ZEB1
Canis familiaris
ENSCAFG00000004023
I
0.832
ZEB1
Bos taurus
ENSBTAG00000020053
I
0.832
Alligator_sinensis_CCG010397.1
Alligator sinensis
Alligator_sinensis_CCG010397.1
I
0.832
ZEB1
Gorilla gorilla
ENSGGOG00000010090
I
0.832
ZEB1
Homo sapiens
ENSG00000148516
D
0.832
ENSP00000319248
Macaca fascicularis
ENSP00000319248
I
0.832
ENSSTOG00000016404
Ictidomys tridecemlineatus
ENSSTOG00000016404
I
0.832
ZEB1
Pan troglodytes
ENSPTRG00000002404
I
0.832
ZEB1
Otolemur garnettii
ENSOGAG00000008365
I
0.832
Cmyd_10008652
Chelonia mydas
Cmyd_10008652
I
0.832
ENSNLEG00000018130
Nomascus leucogenys
ENSNLEG00000018130
I
0.832
Zeb1
Dipodomys ordii
ENSDORG00000007230
I
0.832
ENSMPUG00000013033
Mustela putorius furo
ENSMPUG00000013033
I
0.832
ZEB1
Macaca mulatta
ENSMMUG00000015453
I
0.832
ENSAMEG00000010224
Ailuropoda melanoleuca
ENSAMEG00000010224
I
0.832
ZEB1
Dasypus novemcinctus
ENSDNOG00000016748
I
0.832
ENSPANG00000022899
Papio anubis
ENSPANG00000022899
I
0.832
ZEB1
Loxodonta africana
ENSLAFG00000009663
I
0.831
ENSLOCG00000007239
Lepisosteus oculatus
ENSLOCG00000007239
I
0.831
ENSONIG00000003766
Oreochromis niloticus
ENSONIG00000003766
I
0.828
ZEB1
Anolis carolinensis
ENSACAG00000007353
I
0.827
Tal_R009077
Tyto alba
Tal_R009077
I
0.827
Aan_R013683
Calypte anna
Aan_R013683
I
0.827
Afo_R009258
Aptenodytes forsteri
Afo_R009258
I
0.827
ZEB1
Gallus gallus
ENSGALG00000007260
I
0.827
Zeb1
Rattus norvegicus
ENSRNOG00000017863
I
0.827
ENSAPLG00000007482
Anas platyrhynchos
ENSAPLG00000007482
I
0.827
ZEB1
Meleagris gallopavo
ENSMGAG00000006355
I
0.826
Myotis_brandtii_ZEB1_10033015
Myotis brandtii
Myotis_brandtii_ZEB1_10033015
I
0.824
ZEB1
Monodelphis domestica
ENSMODG00000007847
I
0.824
ZEB1
Sorex araneus
ENSSARG00000010985
I
0.824
ENSFALG00000007118
Ficedula albicollis
ENSFALG00000007118
I
0.822
Gfo_R014876
Geospiza fortis
Gfo_R014876
I
0.822
Zeb1
Mus musculus
ENSMUSG00000024238
D
0.819
ZEB1
Taeniopygia guttata
ENSTGUG00000001020
I
0.817
zeb1b
Oryzias latipes
ENSORLG00000004296
I
0.816
zeb1b
Danio rerio
ENSDARG00000013207
I
0.814
ABC48601
Xenopus laevis
ABC48601
I
0.811
zeb1
Xenopus tropicalis
XB-GENE-484655
I
0.810
ENSXMAG00000005475
Xiphophorus maculatus
ENSXMAG00000005475
I
0.806
ENSPFOG00000013823
Poecilia formosa
ENSPFOG00000013823
I
0.803
zeb1.S
Xenopus laevis
XB-GENE-865109
I
0.800
ZEB2
Pteropus vampyrus
ENSPVAG00000015557
I
0.790
zeb1a
Tetraodon nigroviridis
ENSTNIG00000007962
I
0.783
Tal_R007044
Tyto alba
Tal_R007044
I
0.781
ZEB2
Sorex araneus
ENSSARG00000006858
I
0.781
ENSMEUG00000008997
Macropus eugenii
ENSMEUG00000008997
I
0.781
ZEB2
Tupaia belangeri
ENSTBEG00000013983
I
0.781
ENSOARG00000009880
Ovis aries
ENSOARG00000009880
I
0.781
ENSXMAG00000006005
Xiphophorus maculatus
ENSXMAG00000006005
I
0.775
ENSPFOG00000014121
Poecilia formosa
ENSPFOG00000014121
I
0.775
ENSPFOG00000014086
Poecilia formosa
ENSPFOG00000014086
I
0.775
ENSONIG00000015066
Oreochromis niloticus
ENSONIG00000015066
I
0.765
zeb1b
Gasterosteus aculeatus
ENSGACG00000001002
I
0.762
zeb1b
Takifugu rubripes
ENSTRUG00000001422
I
0.762
ENSTSYG00000009434
Tarsius syrichta
ENSTSYG00000009434
I
0.743
ENSAMXG00000010069
Astyanax mexicanus
ENSAMXG00000010069
I
0.743
ZEB2
Procavia capensis
ENSPCAG00000014674
I
0.743
XP_002936765
Xenopus tropicalis
XP_002936765
I
0.738
zeb1a
Danio rerio
ENSDARG00000016788
I
0.725
zeb1a
Gasterosteus aculeatus
ENSGACG00000017648
I
0.724
ZEB1
Myotis lucifugus
ENSMLUG00000010631
I
0.705
ZEB1
Cavia porcellus
ENSCPOG00000007682
I
0.705