CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R013178
(
Aptenodytes forsteri
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Afo_R013178
T076219_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.765
0.765
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R013178
C2H2 ZF
640
663
LKCPKCNWHYKYQQTLEAHMKEKH
Afo_R013178
C2H2 ZF
695
719
FRCEVCNYSTTTKGNLSIHMQSDKH
Afo_R013178
C2H2 ZF
763
787
WRCEVCDYETNVARNLRIHMTSEKH
Afo_R013178
C2H2 ZF
1017
1041
YYCALCDYSTKVKLNLVQHVRSVKH
Afo_R013178
C2H2 ZF
1346
1368
YRCNHCSLAFKTMQKLQIHSQYH
Afo_R013178
C2H2 ZF
1374
1397
TMCSLCQRSFRTFQALKKHLEAGH
Afo_R013178
C2H2 ZF
1490
1514
YKCTVCKESFTQKNILLVHYNSVSH
Afo_R013178
C2H2 ZF
1542
1566
YKCSICNVAYSQSSTLEIHMRSVLH
Afo_R013178
Homeodomain
2025
2081
KRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ
Afo_R013178
Homeodomain
2122
2178
RSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARK
Afo_R013178
C2H2 ZF
2207
2228
YQCKKCSVVFPRIFDLITHQKK
Afo_R013178
C2H2 ZF
2388
2410
YQCDQCTVAFPTLELWQEHQHMH
Afo_R013178
Homeodomain
2501
2557
KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK
Afo_R013178
C2H2 ZF
2570
2593
KRCPFCRALFKAKSALESHIRSRH
Afo_R013178
Homeodomain
2827
2883
KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Aptenodytes forsteri
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy