Alligator_sinensis_CCG000692.1 (Alligator sinensis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		Alligator_sinensis_CCG000692.1 T076220_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M10088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AFP1_Q6 		0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG000692.1 C2H2 ZF 71 96
Alligator_sinensis_CCG000692.1 C2H2 ZF 112 134
Alligator_sinensis_CCG000692.1 C2H2 ZF 140 163
Alligator_sinensis_CCG000692.1 C2H2 ZF 256 280
Alligator_sinensis_CCG000692.1 C2H2 ZF 307 331
Alligator_sinensis_CCG000692.1 Homeodomain 818 874
Alligator_sinensis_CCG000692.1 Homeodomain 915 971
Alligator_sinensis_CCG000692.1 C2H2 ZF 1000 1021
Alligator_sinensis_CCG000692.1 C2H2 ZF 1203 1225
Alligator_sinensis_CCG000692.1 Homeodomain 1315 1371
Alligator_sinensis_CCG000692.1 C2H2 ZF 1385 1407
Alligator_sinensis_CCG000692.1 Homeodomain 1621 1677

Links

Other C2H2 ZF,Homeodomain family TFs
Other Alligator sinensis TFs

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107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action