Gfo_R000560 (Geospiza fortis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		Gfo_R000560 T076241_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M10088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AFP1_Q6 		0.916 0.916
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R000560 C2H2 ZF 614 637
Gfo_R000560 C2H2 ZF 731 755
Gfo_R000560 C2H2 ZF 1015 1039
Gfo_R000560 C2H2 ZF 1159 1182
Gfo_R000560 C2H2 ZF 1297 1322
Gfo_R000560 C2H2 ZF 1338 1360
Gfo_R000560 C2H2 ZF 1366 1389
Gfo_R000560 C2H2 ZF 1482 1506
Gfo_R000560 C2H2 ZF 1533 1557
Gfo_R000560 Homeodomain 1950 2006
Gfo_R000560 Homeodomain 2047 2103
Gfo_R000560 C2H2 ZF 2132 2153
Gfo_R000560 C2H2 ZF 2333 2355
Gfo_R000560 Homeodomain 2445 2501
Gfo_R000560 C2H2 ZF 2515 2537
Gfo_R000560 Homeodomain 2750 2806

Links

Other C2H2 ZF,Homeodomain family TFs
Other Geospiza fortis TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfhx3 Dipodomys ordii ENSDORG00000016147 I 0.946
ENSAPLG00000002327 Anas platyrhynchos ENSAPLG00000002327 I 0.922
Aan_R009157 Calypte anna Aan_R009157 I 0.922
ENSFALG00000002706 Ficedula albicollis ENSFALG00000002706 I 0.922
Afo_R007434 Aptenodytes forsteri Afo_R007434 I 0.922
ZFHX3 Taeniopygia guttata ENSTGUG00000008190 I 0.922
ZFHX3 Procavia capensis ENSPCAG00000010600 I 0.920
ZFHX3 Gallus gallus ENSGALG00000000713 I 0.920
ZFHX3 Meleagris gallopavo ENSMGAG00000008764 I 0.920
ZFHX3 Myotis lucifugus ENSMLUG00000016100 I 0.918
ZFHX3 Macaca mulatta ENSMMUG00000021041 I 0.918
ZFHX3 Dasypus novemcinctus ENSDNOG00000046047 I 0.918
ENSPPYG00000007513 Pongo abelii ENSPPYG00000007513 I 0.918
ZFHX3 Microcebus murinus ENSMICG00000003537 I 0.918
ENSPANG00000010456 Papio anubis ENSPANG00000010456 I 0.918
ZFHX3 Ornithorhynchus anatinus ENSOANG00000005084 I 0.918
ENSOCUG00000017910 Oryctolagus cuniculus ENSOCUG00000017910 I 0.918
ZFHX3 Echinops telfairi ENSETEG00000014223 I 0.918
ENSP00000268489 Macaca fascicularis ENSP00000268489 I 0.918
ZFHX3 Cavia porcellus ENSCPOG00000009111 I 0.918
ENSCSAG00000004171 Chlorocebus sabaeus ENSCSAG00000004171 I 0.918
ZFHX3 Homo sapiens ENSG00000140836 D 0.916
ZFHX3 Loxodonta africana ENSLAFG00000017476 I 0.916
ZFHX3 Felis catus ENSFCAG00000023839 I 0.916
ZFHX3 Pan troglodytes ENSPTRG00000008340 I 0.916
ENSMPUG00000007747 Mustela putorius furo ENSMPUG00000007747 I 0.916
ENSAMEG00000002197 Ailuropoda melanoleuca ENSAMEG00000002197 I 0.916
Zfhx3 Mus musculus ENSMUSG00000038872 I 0.916
Zfhx3 Rattus norvegicus ENSRNOG00000014452 I 0.916
ZFHX3 Gorilla gorilla ENSGGOG00000012083 I 0.916
ZFHX3 Bos taurus ENSBTAG00000014636 I 0.914
zfhx3 Xenopus tropicalis XB-GENE-853731 I 0.914
ENSOARG00000003669 Ovis aries ENSOARG00000003669 I 0.914
ENSBTAP00000019489-D1 Bos grunniens ENSBTAP00000019489-D1 I 0.914
ZFHX3 Equus caballus ENSECAG00000022984 I 0.914
ZFHX3 Canis familiaris ENSCAFG00000020243 I 0.914
ZFHX3 Monodelphis domestica ENSMODG00000002600 I 0.912
ENSSHAG00000014394 Sarcophilus harrisii ENSSHAG00000014394 I 0.912
Pvit_16272 Pogona vitticeps Pvit_16272 I 0.908
ENSLACG00000015046 Latimeria chalumnae ENSLACG00000015046 I 0.906
zfhx3 Danio rerio ENSDARG00000103057 I 0.902
ENSAMXG00000004340 Astyanax mexicanus ENSAMXG00000004340 I 0.902
ENSLOCG00000004206 Lepisosteus oculatus ENSLOCG00000004206 I 0.900
zfhx3 Oryzias latipes ENSORLG00000007874 I 0.898
ENSPFOG00000001702 Poecilia formosa ENSPFOG00000001702 I 0.894
ENSGMOG00000002909 Gadus morhua ENSGMOG00000002909 I 0.890
ENSONIG00000005914 Oreochromis niloticus ENSONIG00000005914 I 0.888
zfhx3 Takifugu rubripes ENSTRUG00000017601 I 0.888
ZFHX3 Erinaceus europaeus ENSEEUG00000008705 I 0.863
ZFHX3 Callithrix jacchus ENSCJAG00000015112 I 0.861
ZFHX3 Tursiops truncatus ENSTTRG00000002935 I 0.855
ZFHX3 Anolis carolinensis ENSACAG00000008238 I 0.843
ZFHX3 Sorex araneus ENSSARG00000011764 I 0.825
ZFHX3 Sus scrofa ENSSSCG00000002752 I 0.823
Ogr16853 Ophisaurus gracilis Ogr16853 I 0.819
Alligator_sinensis_CCG000692.1 Alligator sinensis Alligator_sinensis_CCG000692.1 I 0.813
ZFHX4 Otolemur garnettii ENSOGAG00000000486 I 0.811
ZFHX3 Otolemur garnettii ENSOGAG00000010886 I 0.811
ENSSTOG00000027206 Ictidomys tridecemlineatus ENSSTOG00000027206 I 0.811
ZFHX4 Pteropus vampyrus ENSPVAG00000004200 I 0.811
ENSPSIG00000003765 Pelodiscus sinensis ENSPSIG00000003765 I 0.811
ENSOARG00000007353 Ovis aries ENSOARG00000007353 I 0.811
Myotis_brandtii_ZFHX3_10022430 Myotis brandtii Myotis_brandtii_ZFHX3_10022430 I 0.811
ENSMPUG00000010092 Mustela putorius furo ENSMPUG00000010092 I 0.811
ENSP00000382394-D1 Bos grunniens ENSP00000382394-D1 I 0.811
ZFHX4 Bos taurus ENSBTAG00000033268 I 0.811
ZFHX4 Felis catus ENSFCAG00000015688 I 0.811
ZFHX4 Canis familiaris ENSCAFG00000008310 I 0.811
ZFHX4 Sorex araneus ENSSARG00000001090 I 0.809
ZFHX4 Oryctolagus cuniculus ENSOCUG00000001723 I 0.809
ENSPANG00000023610 Papio anubis ENSPANG00000023610 I 0.807
ZFHX4 Loxodonta africana ENSLAFG00000014395 I 0.807
ZFHX4 Gorilla gorilla ENSGGOG00000024837 I 0.807
ZFHX4 Equus caballus ENSECAG00000022611 I 0.807
ENSCSAG00000013465 Chlorocebus sabaeus ENSCSAG00000013465 I 0.807
ZFHX4 Cavia porcellus ENSCPOG00000012693 I 0.807
ENSP00000382394 Macaca fascicularis ENSP00000382394 I 0.807
XP_002939633 Xenopus tropicalis XP_002939633 I 0.807
ZFHX4 Callithrix jacchus ENSCJAG00000000517 I 0.807
ENSAMXG00000013609 Astyanax mexicanus ENSAMXG00000013609 I 0.805
ENSSTOG00000024425 Ictidomys tridecemlineatus ENSSTOG00000024425 I 0.805
zfhx4 Danio rerio ENSDARG00000075542 I 0.805
ZFHX4 Tupaia belangeri ENSTBEG00000012567 I 0.805
ZFHX4 Homo sapiens ENSG00000091656 I 0.805
Zfhx4 Rattus norvegicus ENSRNOG00000008765 I 0.803
ZFHX4 Sus scrofa ENSSSCG00000006169 I 0.799
ZFHX4 Pan troglodytes ENSPTRG00000020358 I 0.789
zfhx3 Gasterosteus aculeatus ENSGACG00000015779 I 0.783
si:ch73-386h18.1 Danio rerio ENSDARG00000073944 I 0.783
ENSPSIG00000004618 Pelodiscus sinensis ENSPSIG00000004618 I 0.779
ENSAMEG00000016203 Ailuropoda melanoleuca ENSAMEG00000016203 I 0.777
zfhx4 Takifugu rubripes ENSTRUG00000000173 I 0.775
Zfhx4 Mus musculus ENSMUSG00000025255 I 0.770
ENSXMAG00000000693 Xiphophorus maculatus ENSXMAG00000000693 I 0.770
ENSPFOG00000009152 Poecilia formosa ENSPFOG00000009152 I 0.770
zfhx4 Oryzias latipes ENSORLG00000006928 I 0.768
ENSONIG00000014495 Oreochromis niloticus ENSONIG00000014495 I 0.768
zfhx4 Gasterosteus aculeatus ENSGACG00000002418 I 0.768
Tal_R008844 Tyto alba Tal_R008844 I 0.755
Gfo_R007559 Geospiza fortis Gfo_R007559 I 0.755
Aan_R002979 Calypte anna Aan_R002979 I 0.755
ZFHX4 Monodelphis domestica ENSMODG00000006777 I 0.755
ENSSHAG00000013776 Sarcophilus harrisii ENSSHAG00000013776 I 0.755
ENSGALG00000015673 Gallus gallus ENSGALG00000015673 I 0.755
ENSFALG00000008584 Ficedula albicollis ENSFALG00000008584 I 0.755
Afo_R013178 Aptenodytes forsteri Afo_R013178 I 0.755
Pvit_00058 Pogona vitticeps Pvit_00058 I 0.753
ENSAPLG00000012910 Anas platyrhynchos ENSAPLG00000012910 I 0.753
ZFHX4 Microcebus murinus ENSMICG00000008252 I 0.751
ENSLOCG00000013472 Lepisosteus oculatus ENSLOCG00000013472 I 0.747
ENSPPYG00000018687 Pongo abelii ENSPPYG00000018687 I 0.725
Cmyd_10008318 Chelonia mydas Cmyd_10008318 N 0.715
ENSMGAG00000011602 Meleagris gallopavo ENSMGAG00000011602 I 0.705
ENSNLEG00000001972 Nomascus leucogenys ENSNLEG00000001972 I 0.701