Gfo_R007559 (Geospiza fortis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		Gfo_R007559 T076243_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M10088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AFP1_Q6 		0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R007559 C2H2 ZF 640 663
Gfo_R007559 C2H2 ZF 695 719
Gfo_R007559 C2H2 ZF 763 787
Gfo_R007559 C2H2 ZF 1017 1041
Gfo_R007559 C2H2 ZF 1351 1373
Gfo_R007559 C2H2 ZF 1379 1402
Gfo_R007559 C2H2 ZF 1495 1519
Gfo_R007559 C2H2 ZF 1547 1571
Gfo_R007559 Homeodomain 2030 2086
Gfo_R007559 Homeodomain 2127 2183
Gfo_R007559 C2H2 ZF 2212 2233
Gfo_R007559 C2H2 ZF 2393 2415
Gfo_R007559 Homeodomain 2506 2562
Gfo_R007559 C2H2 ZF 2575 2598
Gfo_R007559 Homeodomain 2832 2888

Links

Other C2H2 ZF,Homeodomain family TFs
Other Geospiza fortis TFs

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119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action