CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr16853
(
Ophisaurus gracilis
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Ogr16853
T076254_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.843
0.843
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr16853
C2H2 ZF
97
121
YHCALCNYSTKAKLNLIQHVRSMKH
Ogr16853
C2H2 ZF
566
591
FLCWKKGCSQGFKSSTALQAHFNEAH
Ogr16853
C2H2 ZF
607
629
YRCNQCSLAFKTVEKLQLHSQYH
Ogr16853
C2H2 ZF
635
658
TMCCLCQRSFRTFQALKKHLETSH
Ogr16853
C2H2 ZF
751
775
YKCTVCKESFTQKNILLVHYNSVSH
Ogr16853
C2H2 ZF
802
826
FKCSTCNVAYSQSSTLEIHMRSVLH
Ogr16853
Homeodomain
1307
1363
KRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ
Ogr16853
Homeodomain
1404
1460
RSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK
Ogr16853
C2H2 ZF
1489
1510
YQCKKCSLVFQRIFDLIKHQKK
Ogr16853
C2H2 ZF
1680
1702
YQCDQCKLAFPSFEHWQEHQQLH
Ogr16853
Homeodomain
1792
1848
KRLRTTITPEQLEVLYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK
Ogr16853
C2H2 ZF
1862
1884
RCPFCRALFKAKTALEAHIRSRH
Ogr16853
Homeodomain
2100
2156
KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Ophisaurus gracilis
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy