CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_00058
(
Pogona vitticeps
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Pvit_00058
T076255_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.763
0.763
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_00058
C2H2 ZF
639
662
LKCPKCNWHYKYQQTLEAHMKEKH
Pvit_00058
C2H2 ZF
694
718
FRCEVCNYSTTTKGNLSIHMQSDKH
Pvit_00058
C2H2 ZF
762
786
WRCEVCDYETNVARNLRIHMTSEKH
Pvit_00058
C2H2 ZF
1016
1040
YYCALCDYSTKVKLNLVQHVRSVKH
Pvit_00058
C2H2 ZF
1369
1391
YRCNHCSLAFKTMQKLQIHSQYH
Pvit_00058
C2H2 ZF
1397
1420
TMCSLCQRSFRTFQALKKHLEAGH
Pvit_00058
C2H2 ZF
1513
1537
YKCTVCKESFTQKNILLVHYNSVSH
Pvit_00058
C2H2 ZF
1565
1589
YKCSICNVSYSQSSTLEIHMRSVLH
Pvit_00058
Homeodomain
2087
2143
KRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ
Pvit_00058
Homeodomain
2184
2240
RSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARK
Pvit_00058
C2H2 ZF
2269
2290
YQCKKCSIVFPRIFDLITHQKK
Pvit_00058
C2H2 ZF
2451
2473
YQCDQCTVAFPTLELWQEHQHMH
Pvit_00058
Homeodomain
2565
2621
KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK
Pvit_00058
C2H2 ZF
2634
2657
KRCPFCRALFKAKSALESHIRSRH
Pvit_00058
Homeodomain
2890
2946
KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Pogona vitticeps
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy