Pvit_13221 (Pogona vitticeps)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		Pvit_13221 T076258_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.981 0.981
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.814 0.814
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.814 0.814
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.814 0.814
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.814 0.814
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.814 0.814
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.814 0.814
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.814 0.814
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.814 0.814
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.814 0.814
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.814 0.814
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.814 0.814
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.810 0.810
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.810 0.810
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_13221 C2H2 ZF 187 210
Pvit_13221 C2H2 ZF 217 239
Pvit_13221 C2H2 ZF 258 280
Pvit_13221 C2H2 ZF 286 307
Pvit_13221 Homeodomain 624 674
Pvit_13221 C2H2 ZF 975 997
Pvit_13221 C2H2 ZF 1003 1025
Pvit_13221 C2H2 ZF 1031 1052

Links

Other C2H2 ZF,Homeodomain family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action