CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Tal_R008844
(
Tyto alba
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Tal_R008844
T076261_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.765
0.765
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tal_R008844
C2H2 ZF
636
659
LKCPKCNWHYKYQQTLEAHMKEKH
Tal_R008844
C2H2 ZF
691
715
FRCEVCNYSTTTKGNLSIHMQSDKH
Tal_R008844
C2H2 ZF
759
783
WRCEVCDYETNVARNLRIHMTSEKH
Tal_R008844
C2H2 ZF
1013
1037
YYCALCDYSTKVKLNLVQHVRSVKH
Tal_R008844
C2H2 ZF
1342
1364
YRCNHCSLAFKTMQKLQIHSQYH
Tal_R008844
C2H2 ZF
1370
1393
TMCSLCQRSFRTFQALKKHLEAGH
Tal_R008844
C2H2 ZF
1486
1510
YKCTVCKESFTQKNILLVHYNSVSH
Tal_R008844
C2H2 ZF
1538
1562
YKCSICNVAYSQSSTLEIHMRSVLH
Tal_R008844
Homeodomain
2021
2077
KRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ
Tal_R008844
Homeodomain
2118
2174
RSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARK
Tal_R008844
C2H2 ZF
2203
2224
YQCKKCSVVFPRIFDLITHQKK
Tal_R008844
C2H2 ZF
2384
2406
YQCDQCTVAFPTLELWQEHQHMH
Tal_R008844
Homeodomain
2497
2553
KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK
Tal_R008844
C2H2 ZF
2566
2589
KRCPFCRALFKAKSALESHIRSRH
Tal_R008844
Homeodomain
2823
2879
KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Tyto alba
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy