zeb1.S (Xenopus laevis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
XB-GENE-865109 T076298_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN

NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.966 0.966
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG

CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.966 0.966
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG

CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.966 0.966
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.966 0.966
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY

RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.966 0.966
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN

NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.966 0.966
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV

BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.966 0.966
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB

VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.966 0.966
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV

BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.966 0.966
ZEB1
M10094_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.966 0.966
ZEB1
M10095_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.966 0.966
Zeb1
M05844_2.00
Mus musculus
NYACCTGN

NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.961 0.961
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV

BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.961 0.961
ZEB2
M10096_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH73606 C2H2 ZF 173 196
AAH73606 C2H2 ZF 203 225
AAH73606 C2H2 ZF 243 265
AAH73606 C2H2 ZF 271 292
AAH73606 Homeodomain 582 628
AAH73606 C2H2 ZF 892 914
AAH73606 C2H2 ZF 920 942
AAH73606 C2H2 ZF 948 969

Links

Other C2H2 ZF,Homeodomain family TFs
Other Xenopus laevis TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.981
ABC48601 Xenopus laevis ABC48601 I 0.971
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.966
ZEB1 Sorex araneus ENSSARG00000010985 I 0.966
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.962
ZEB1 Gallus gallus ENSGALG00000007260 I 0.962
Aan_R013683 Calypte anna Aan_R013683 I 0.962
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.962
Tal_R009077 Tyto alba Tal_R009077 I 0.962
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.962
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.962
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.961
Zeb1 Mus musculus ENSMUSG00000024238 D 0.961
ZEB1 Homo sapiens ENSG00000148516 D 0.957
ZEB1 Felis catus ENSFCAG00000010440 I 0.957
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.957
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.957
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.957
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.957
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.957
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.957
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.957
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.957
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.957
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.957
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.957
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.957
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.957
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.957
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.957
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.957
ZEB1 Bos taurus ENSBTAG00000020053 I 0.957
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.957
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.957
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.957
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.957
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.957
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.957
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.952
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.947
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.947
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.943
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.942
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.928
zeb1b Danio rerio ENSDARG00000013207 I 0.893
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.862
zeb1b Oryzias latipes ENSORLG00000004296 I 0.854
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.850
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.845
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.845
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.845
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.841
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.805
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.805
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.805
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.805
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.805
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.805
ZEB2 Equus caballus ENSECAG00000019355 I 0.805
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.805
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.805
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.805
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.805
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.805
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.805
XP_002936766 Xenopus tropicalis XP_002936766 I 0.805
XP_002936763 Xenopus tropicalis XP_002936763 I 0.805
ZEB2 Bos taurus ENSBTAG00000012615 I 0.805
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.805
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.805
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.805
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.805
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.805
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.805
ZEB2 Felis catus ENSFCAG00000015532 I 0.805
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.805
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.805
Zeb2 Mus musculus ENSMUSG00000026872 I 0.805
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.805
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.805
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.805
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.805
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.805
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.805
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.805
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.805
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.805
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.805
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.805
ZEB2 Homo sapiens ENSG00000169554 D 0.805
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.805
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.805
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.804
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.804
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.804
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.801
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.800
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.800
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.800
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.800
Aan_R003058 Calypte anna Aan_R003058 I 0.800
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.800
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.799
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.799
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.799
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.796
zeb2.S Xenopus laevis XB-GENE-865280 I 0.795
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.793
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.790
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.790
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.790
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.771
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.769
zeb1a Danio rerio ENSDARG00000016788 I 0.768
ENSOARG00000013971 Ovis aries ENSOARG00000013971 I 0.752
ZEB1 Procavia capensis ENSPCAG00000004425 I 0.752
ZEB1 Equus caballus ENSECAG00000020102 I 0.752
ZEB1 Oryctolagus cuniculus ENSOCUG00000006516 I 0.748
ZEB1 Tursiops truncatus ENSTTRG00000011798 I 0.748
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.746
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.745
Pvit_04101 Pogona vitticeps Pvit_04101 I 0.743
ZEB1 Erinaceus europaeus ENSEEUG00000006386 I 0.738
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.735
ENSTSYG00000009177 Tarsius syrichta ENSTSYG00000009177 I 0.709