CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002939633
(
Xenopus tropicalis
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
XP_002939633
T076303_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.873
0.873
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002939633
C2H2 ZF
639
662
LKCPKCNWHYKYQQTLEAHMKEKH
XP_002939633
C2H2 ZF
694
718
FRCEVCNYSTTTKGNLSIHMQSDKH
XP_002939633
C2H2 ZF
762
786
WRCEVCDYETNVARNLRIHMTSEKH
XP_002939633
C2H2 ZF
1042
1066
YYCALCDYSTKIKLNLVQHVRSVKH
XP_002939633
C2H2 ZF
1207
1230
YQCPYCNYNSKDPNRIQMHILSQH
XP_002939633
C2H2 ZF
1387
1409
YRCTHCSLAFKTMQKLQIHSQYH
XP_002939633
C2H2 ZF
1415
1438
TMCSLCQRSFRTFLALKKHLETGH
XP_002939633
C2H2 ZF
1531
1555
YKCTVCKESFTQKNILLVHYNSVSH
XP_002939633
C2H2 ZF
1583
1607
FKCSICNVAYSQSSTLEIHMRSVLH
XP_002939633
Homeodomain
2108
2164
KRPRTRITDDQLKILRTYFDINNSPNEDQIQEMADKSGLSLKVIKHWFRNTLFKERQ
XP_002939633
Homeodomain
2205
2261
RSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLATRVIVVWFQNARQKARK
XP_002939633
C2H2 ZF
2290
2311
YQCKKCSVVFPRIFDLITHQKK
XP_002939633
C2H2 ZF
2462
2484
YQCDQCTIAFPTLELWQEHQHMH
XP_002939633
Homeodomain
2571
2627
KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK
XP_002939633
C2H2 ZF
2640
2663
KRCPFCRALFKAKSALESHIRSRH
XP_002939633
Homeodomain
2894
2950
KRFRTQMSNLQLKVLKACFCDYRTPTMQECEILGNEIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Xenopus tropicalis
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy