CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB08612.1
(
Alternaria brassicicola
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
AB08612.1
T076304_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB08612.1
Homeodomain
83
139
GSRFSREVIRTLKDWLSVHQKHPYPSEREMLVLQDRTGLNKAQLTNWFANARRRGKV
AB08612.1
C2H2 ZF
278
301
YQCTFCTEVFKTKYDWQRHEKSLH
AB08612.1
C2H2 ZF
347
371
CQERSLQERTFHRKDHLVQHLRLVH
AB08612.1
C2H2 ZF
392
414
SKCGFCGTTMSTWSERTDHIADH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Alternaria brassicicola
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LEMA_P008710.1
Leptosphaeria maculans
LEMA_P008710.1
N
0.737
COCCADRAFT_38281
Bipolaris zeicola
COCCADRAFT_38281
N
0.737
COCVIDRAFT_41052
Bipolaris victoriae
COCVIDRAFT_41052
N
0.737
COCSADRAFT_124944
Bipolaris sorokiniana
COCSADRAFT_124944
N
0.737
SETTUDRAFT_136488
Setosphaeria turcica
SETTUDRAFT_136488
N
0.729
PTT_18691
Pyrenophora teres
PTT_18691
N
0.703