CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0000677101
(
Heligmosomoides bakeri
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
HPBE_0000677101
T076372_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0000677101-mRNA-1
Homeodomain
95
151
KRARTRITDDQLKILRQYFDINNSPSEAQIKEMSLKAGLPEKVIKHWFRNTLFKERQ
HPBE_0000677101-mRNA-1
Homeodomain
246
302
RANRTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVIVVWFQNARQKARK
HPBE_0000677101-mRNA-1
C2H2 ZF
324
345
FQCKRCSLVFQRYYELIQHQQK
HPBE_0000677101-mRNA-1
C2H2 ZF
421
442
KRCPFCGLLFRSRQTLQEHIPA
HPBE_0000677101-mRNA-1
Homeodomain
532
577
KRYRTHLTPTQVHVMKSVFGDYKTPSMTECEALGREIGLHKRVVQH
HPBE_0000677101-mRNA-1
C2H2 ZF
716
737
WACTSCTNVFQQEALLKNHQRT
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Heligmosomoides bakeri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_04497
Ancylostoma ceylanicum
ANCCEY_04497
N
0.960
ANCCAN_02499
Ancylostoma caninum
ANCCAN_02499
N
0.907
ACOC_0001055101
Angiostrongylus costaricensis
ACOC_0001055101
N
0.876
scaffold58-EXSNAP2012.10
Pristionchus exspectatus
scaffold58-EXSNAP2012.10
N
0.776
SVE_1664000
Strongyloides venezuelensis
SVE_1664000
N
0.773