CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g23719
(
Steinernema carpocapsae
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
L596_g23719
T076375_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g23719.t1
C2H2 ZF
20
42
FKCNECSKAFKFKHHLKEHLRIH
L596_g23719.t1
C2H2 ZF
48
69
FECPNCHKRFSHSGSFSSHMSS
L596_g23719.t1
Homeodomain
214
270
LRSRSFLTDAQVAILHNQYKRNPFPSKYELSAMAEQINVNKRVVQVWFQNTRAKQRR
L596_g23719.t1
C2H2 ZF
511
533
YACDQCDKMFGKQSSLARHKYEH
L596_g23719.t1
C2H2 ZF
539
561
YKCDVCEKAFKHKHHLTEHKRLH
L596_g23719.t1
C2H2 ZF
567
588
FQCDKCLKRFSHSGSFSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Steinernema carpocapsae
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g21703
Steinernema scapterisci
L892_g21703
N
1.000
L889_g29456
Steinernema feltiae
L889_g29456
N
0.988
L898_g6841
Steinernema monticolum
L898_g6841
N
0.988
L893_g27223
Steinernema glaseri
L893_g27223
N
0.988
Bm3681
Brugia malayi
Bm3681
N
0.918
LOAG_17507
Loa loa
LOAG_17507
N
0.918
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.912
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.906
ASU_02713
Ascaris suum
ASU_02713
N
0.900
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
0.900
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
0.900
DICVIV_05785
Dictyocaulus viviparus
DICVIV_05785
N
0.900
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.894
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.894
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.894
CJA12606
Caenorhabditis japonica
CJA12606
N
0.888
CBN31083
Caenorhabditis brenneri
CBN31083
N
0.888
CBN24068
Caenorhabditis brenneri
CBN24068
N
0.888
CBG10736
Caenorhabditis briggsae
CBG10736
N
0.888
CRE10982
Caenorhabditis remanei
CRE10982
N
0.888
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
0.882
zag-1
Caenorhabditis elegans
WBGene00006970
N
0.882
SBAD_0000454101
Soboliphyme baturini
SBAD_0000454101
N
0.812
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
0.800
EFV59106
Trichinella spiralis
EFV59106
N
0.800
HCOI00581300
Haemonchus contortus
HCOI00581300
N
0.794
D918_03480
Trichuris suis
D918_03480
N
0.793
TMUE_s0010015900
Trichuris muris
TMUE_s0010015900
N
0.793
TTRE_0000009201
Trichuris trichiura
TTRE_0000009201
N
0.793
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
0.788
nAv.1.0.1.g02082
Acanthocheilonema viteae
nAv.1.0.1.g02082
N
0.788
D917_10103
Trichinella nativa
D917_10103
N
0.780
ASIM_0001204901
Anisakis simplex
ASIM_0001204901
N
0.771
YQE_04155
Dendroctonus ponderosae
YQE_04155
N
0.729
YQE_00812
Dendroctonus ponderosae
YQE_00812
N
0.729
SINV25541
Solenopsis invicta
SINV25541
N
0.706
YQE_02569
Dendroctonus ponderosae
YQE_02569
N
0.700