CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g29456
(
Steinernema feltiae
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
L889_g29456
T076376_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g29456.t1
C2H2 ZF
39
61
FKCNECSKAFKFKHHLKEHLRIH
L889_g29456.t1
C2H2 ZF
67
88
FECPNCHKRFSHSGSFSSHMSS
L889_g29456.t1
Homeodomain
240
296
LRSRSFLTDAQVAILHTQYKRNPFPSKYELSAMAEQIGVNKRVVQVWFQNTRAKQRR
L889_g29456.t1
C2H2 ZF
553
575
YACDQCDKMFGKQSSLARHKYEH
L889_g29456.t1
C2H2 ZF
581
603
YKCDVCEKAFKHKHHLTEHKRLH
L889_g29456.t1
C2H2 ZF
609
630
FQCDKCLKRFSHSGSFSQHMNH
L889_g29456.t2
C2H2 ZF
39
61
FKCNECSKAFKFKHHLKEHLRIH
L889_g29456.t2
C2H2 ZF
67
88
FECPNCHKRFSHSGSFSSHMSS
L889_g29456.t2
Homeodomain
240
296
LRSRSFLTDAQVAILHTQYKRNPFPSKYELSAMAEQIGVNKRVVQVWFQNTRAKQRR
L889_g29456.t2
C2H2 ZF
555
577
YACDQCDKMFGKQSSLARHKYEH
L889_g29456.t2
C2H2 ZF
583
605
YKCDVCEKAFKHKHHLTEHKRLH
L889_g29456.t2
C2H2 ZF
611
632
FQCDKCLKRFSHSGSFSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Steinernema feltiae
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy