CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig1668.frz3.gene3
(
Meloidogyne hapla
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
MhA1_Contig1668.frz3.gene3
T076385_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig1668.frz3.gene3
Homeodomain
270
326
KRARTRIGDDHVKILRQYFDINNSPSEEQIKEMAQRTNLAEKVIKHWFRNTLFKERQ
MhA1_Contig1668.frz3.gene3
Homeodomain
636
686
RANRTRFTDFQLRTMQEFFDKQAYPKDDDLEMLSKKLGLSPRVIVVWFQVT
MhA1_Contig1668.frz3.gene3
C2H2 ZF
698
719
FQCRVCGQVFQRYLELIQHQQR
MhA1_Contig1668.frz3.gene3
C2H2 ZF
822
844
QCPLCGLQFNCNDKLAKHISENH
MhA1_Contig1668.frz3.gene3
Homeodomain
957
1013
KRFRTHLTPMQVFVMKSLFHDYKTPSMQECDSLGRRIGLTKRVVQVWFQNTRAKERK
MhA1_Contig1668.frz3.gene3
C2H2 ZF
1241
1260
CQNCNNVFQQPELLQNHWKL
MhA1_Contig1668.frz3.gene3
C2H2 ZF
1278
1302
YQCNPCQKKFGTQDDFCDHYLSAEH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Meloidogyne hapla
TFs
0 Related TFs
">No related TF found