CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g02082
(
Acanthocheilonema viteae
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
nAv.1.0.1.g02082
T076386_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t02082-RA
C2H2 ZF
40
62
FKCSECPKAFKFKHHLKEHIRIH
nAv.1.0.1.t02082-RA
C2H2 ZF
99
120
KQCPHCQKRFSHSGSYSSHMSS
nAv.1.0.1.t02082-RA
Homeodomain
285
341
LRSRSFLTDAQVAILHAHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERR
nAv.1.0.1.t02082-RA
C2H2 ZF
585
607
YACDQCDKMFGKQSSLARHKYEH
nAv.1.0.1.t02082-RA
C2H2 ZF
613
635
YKCDVCEKAFKHKHHLTEHKRLH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Acanthocheilonema viteae
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001204901
Anisakis simplex
ASIM_0001204901
N
0.959
LOAG_17507
Loa loa
LOAG_17507
N
0.865
Bm3681
Brugia malayi
Bm3681
N
0.865
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.853
ASU_02713
Ascaris suum
ASU_02713
N
0.841
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.835
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
0.824
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.812
OESDEN_02673
Oesophagostomum dentatum
OESDEN_02673
N
0.797
L898_g6841
Steinernema monticolum
L898_g6841
N
0.794
L889_g29456
Steinernema feltiae
L889_g29456
N
0.794
L893_g27223
Steinernema glaseri
L893_g27223
N
0.794
L892_g21703
Steinernema scapterisci
L892_g21703
N
0.788
L596_g23719
Steinernema carpocapsae
L596_g23719
N
0.788
CRE10982
Caenorhabditis remanei
CRE10982
N
0.782
CBG10736
Caenorhabditis briggsae
CBG10736
N
0.782
CBN31083
Caenorhabditis brenneri
CBN31083
N
0.782
CBN24068
Caenorhabditis brenneri
CBN24068
N
0.782
CJA12606
Caenorhabditis japonica
CJA12606
N
0.782
zag-1
Caenorhabditis elegans
WBGene00006970
N
0.776
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
0.771
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
0.771
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.765
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.765
DICVIV_05785
Dictyocaulus viviparus
DICVIV_05785
N
0.746
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
0.706