CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g03638
(
Acanthocheilonema viteae
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
nAv.1.0.1.g03638
T076387_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t03638-RA
C2H2 ZF
117
140
TRCTKCDQSFRSHELLKRHNAQEH
nAv.1.0.1.t03638-RA
C2H2 ZF
179
203
FKCELCKENFEQKHQLLMHYNSIAH
nAv.1.0.1.t03638-RA
C2H2 ZF
244
268
FKCNLCKLGYGQGSTLDIHIRSVAH
nAv.1.0.1.t03638-RA
C2H2 ZF
471
494
TECTKCNKIFSSIWVLKAHYEEVH
nAv.1.0.1.t03638-RA
Homeodomain
677
733
KRARTRITDDQLKILRQYFDINNSPSEQQIKEMSVKAQLPEKVIKHWFRNTLFKERQ
nAv.1.0.1.t03638-RA
Homeodomain
840
896
RANRTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVIVVWFQNARQKARK
nAv.1.0.1.t03638-RA
C2H2 ZF
918
939
FQCKRCQLVFQRYYELIQHQQK
nAv.1.0.1.t03638-RA
Homeodomain
1179
1235
KRYRTHLTPLQVHVMKSIFMSYKTPSMNECDLLGAEIGLHKRVVQVWFQNARAKERK
nAv.1.0.1.t03638-RA
C2H2 ZF
1251
1275
IRCAVCGVSYDHRITLHDHIFTTGH
nAv.1.0.1.t03638-RA
C2H2 ZF
1422
1443
WACPQCTNVFQQEQLLKNHQRL
nAv.1.0.1.t03638-RA
C2H2 ZF
1459
1483
YQCRACNTKFGAQTEFRVHCDTLEH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Acanthocheilonema viteae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nOo.2.0.1.g04516
Onchocerca ochengi
nOo.2.0.1.g04516
N
0.799
WBGene00237286
Onchocerca volvulus
WBGene00237286
N
0.799
LOAG_18304
Loa loa
LOAG_18304
N
0.790