CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nOo.2.0.1.g04516
(
Onchocerca ochengi
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
nOo.2.0.1.g04516
T076395_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t04516-RA
C2H2 ZF
49
72
TRCTKCDQSFRSHELLKGHNTQEH
nOo.2.0.1.t04516-RA
C2H2 ZF
110
134
FKCELCKENFEQKHQLLIHYNSVTH
nOo.2.0.1.t04516-RA
C2H2 ZF
175
199
FKCNLCKLGYGQSSTLDIHIRSVAH
nOo.2.0.1.t04516-RA
C2H2 ZF
392
415
IECTKCNKIFSSIWVLKAHYEQVH
nOo.2.0.1.t04516-RA
Homeodomain
596
652
KRARTRITDDQLKILRQYFDINNSPSEQQIKEMSVKAQLPEKVIKHWFRNTLFKERQ
nOo.2.0.1.t04516-RA
Homeodomain
762
818
RANRTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVIVVWFQNARQKARK
nOo.2.0.1.t04516-RA
C2H2 ZF
840
861
FQCKRCQLVFQRYYELIQHQQK
nOo.2.0.1.t04516-RA
Homeodomain
1100
1156
KRYRTHLTPLQVHVMKSIFMNYKTPSMNECDLLGAEIGLHKRVVQVWFQNARAKERK
nOo.2.0.1.t04516-RA
C2H2 ZF
1344
1365
WACPQCTNVFQQEQLLKNHQRL
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Onchocerca ochengi
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00237286
Onchocerca volvulus
WBGene00237286
N
1.000
LOAG_18304
Loa loa
LOAG_18304
N
0.951
Bm7351
Brugia malayi
Bm7351
N
0.840
nAv.1.0.1.g03638
Acanthocheilonema viteae
nAv.1.0.1.g03638
N
0.799
nLs.2.1.2.g02278
Litomosoides sigmodontis
nLs.2.1.2.g02278
N
0.795
BXY_0681100
Bursaphelenchus xylophilus
BXY_0681100
N
0.704