CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RSKR_0000341000
(
Rhabditophanes kr3021
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
RSKR_0000341000
T076400_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000341000.1
C2H2 ZF
57
79
FECEECGVVFDSLNLLNSHKVIH
RSKR_0000341000.1
Homeodomain
565
621
KRARTRITDDQLKILRQYFDINNSPSEVQIKEMSVKAGLAEKVIKHWFRNTLFKERQ
RSKR_0000341000.1
Homeodomain
820
876
RANRTRFTDFQLRTMREFFLKQPYPKDDDLEMLSKKLQLSPRVIVVWFQNSRQGKRK
RSKR_0000341000.1
C2H2 ZF
903
924
FQCKRCNIVFQRYYELIQHQHN
RSKR_0000341000.1
C2H2 ZF
1024
1047
KRCMICKAPFYSKETLTAHINANH
RSKR_0000341000.1
Homeodomain
1154
1210
KRYRTHLSPLQVHVMTSIFNDYKTPSMAECEALGASIGLHKRVVQVYFQNKRASRKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Rhabditophanes kr3021
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001055101
Angiostrongylus costaricensis
ACOC_0001055101
N
0.728