CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SBAD_0000454101
(
Soboliphyme baturini
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
SBAD_0000454101
T076402_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SBAD_0000454101-mRNA-1
C2H2 ZF
182
204
FKCHDCNKAFKFKHHLKEHLRIH
SBAD_0000454101-mRNA-1
C2H2 ZF
210
231
FQCPYCQKRFSHSGSFSSHMSR
SBAD_0000454101-mRNA-1
Homeodomain
427
472
LRSRNYLSDDQVRLLQYHYRVNPFPSKAALNSLTEQIGVNKRVVQL
SBAD_0000454101-mRNA-1
C2H2 ZF
743
765
YACDQCDKMFGKQSSLARHKYEH
SBAD_0000454101-mRNA-1
C2H2 ZF
771
785
YKCDVCDKAFKHKXX
SBAD_0000454101-mRNA-1
C2H2 ZF
823
844
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Soboliphyme baturini
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g21703
Steinernema scapterisci
L892_g21703
N
0.812
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.812
L596_g23719
Steinernema carpocapsae
L596_g23719
N
0.812
SMUV_0000904801
Syphacia muris
SMUV_0000904801
N
0.805
EFV59106
Trichinella spiralis
EFV59106
N
0.805
CBN24068
Caenorhabditis brenneri
CBN24068
N
0.785
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.785
CRE10982
Caenorhabditis remanei
CRE10982
N
0.785
CBG10736
Caenorhabditis briggsae
CBG10736
N
0.785
CJA12606
Caenorhabditis japonica
CJA12606
N
0.785
CBN31083
Caenorhabditis brenneri
CBN31083
N
0.785
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.785
nRc.2.0.1.g22459
Romanomermis culicivorax
nRc.2.0.1.g22459
N
0.745
D917_10103
Trichinella nativa
D917_10103
N
0.732
ASU_02713
Ascaris suum
ASU_02713
N
0.729
TTRE_0000009201
Trichuris trichiura
TTRE_0000009201
N
0.728
D918_03480
Trichuris suis
D918_03480
N
0.728
TMUE_s0010015900
Trichuris muris
TMUE_s0010015900
N
0.728
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.724
Bm3681
Brugia malayi
Bm3681
N
0.724
LOAG_17507
Loa loa
LOAG_17507
N
0.724
DICVIV_05785
Dictyocaulus viviparus
DICVIV_05785
N
0.723
L889_g29456
Steinernema feltiae
L889_g29456
N
0.718
L898_g6841
Steinernema monticolum
L898_g6841
N
0.718
L893_g27223
Steinernema glaseri
L893_g27223
N
0.718
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.718