CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold58-EXSNAP2012.10
(
Pristionchus exspectatus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
scaffold58-EXSNAP2012.10
T076404_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold58-EXSNAP2012.10
Homeodomain
1
33
MRKVLRQYFDINNSPTEEAIKEMSIKAGLPEKV
scaffold58-EXSNAP2012.10
Homeodomain
163
219
RANRTRFTDHQLRTLQQFFDKQAYPKDDDLEMLSKKLQLSPRVIVVWFQNARQKARK
scaffold58-EXSNAP2012.10
C2H2 ZF
241
262
FQCKRCSLVFQRYYELIDHQQK
scaffold58-EXSNAP2012.10
C2H2 ZF
364
387
KRCPLCALLFRSAPSLIDHLQLKH
scaffold58-EXSNAP2012.10
Homeodomain
466
522
KRYRTHLTPLQVYVMKCVFSDYKTPSMSECETLGREVGLHKRVVQVWFQNARAKERK
scaffold58-EXSNAP2012.10
C2H2 ZF
700
721
WACPGCSNVFQQESMLLAHQKT
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Pristionchus exspectatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy