CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000904801
(
Syphacia muris
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
SMUV_0000904801
T076405_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000904801-mRNA-1
C2H2 ZF
37
59
FKCSECPKAFKFKHHLKEHIRIH
SMUV_0000904801-mRNA-1
C2H2 ZF
65
86
FQCSHCQKRFSHSGSYSSHMSS
SMUV_0000904801-mRNA-1
Homeodomain
289
345
LRSRSFLTDAQVVILHSHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERR
SMUV_0000904801-mRNA-1
C2H2 ZF
577
599
YPCDQCEKTFGKQSSLARHKYEH
SMUV_0000904801-mRNA-1
C2H2 ZF
605
627
YKCDVCDKAFKHKHHLTEHKRLH
SMUV_0000904801-mRNA-1
C2H2 ZF
633
654
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Syphacia muris
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy