CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1904900
(
Strongyloides venezuelensis
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
SVE_1904900
T076413_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1904900.1
C2H2 ZF
39
61
FKCSECSKAFKFKHHLKEHIRIH
SVE_1904900.1
C2H2 ZF
67
88
FECPNCHKRFSHSGSYSSHMSS
SVE_1904900.1
Homeodomain
264
320
LRSRSFLSDTQVATLYNQFKKNRFPSKYELSALAEQIGVNKRVVQVWFQNTRAKERR
SVE_1904900.1
C2H2 ZF
572
594
FSCDQCEKTFGKQSSLARHKYEH
SVE_1904900.1
C2H2 ZF
600
622
YKCDVCEKAFKHKHHLTEHKRLH
SVE_1904900.1
C2H2 ZF
628
649
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Strongyloides venezuelensis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy