ZSCAN29 (Choloepus hoffmanni)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSCHOG00000009706 T076438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.989 0.989
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.989 0.989
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.989 0.989
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000008575 MADF 262 329
ENSCHOP00000008575 MADF 426 493
ENSCHOP00000008575 C2H2 ZF 679 701
ENSCHOP00000008575 C2H2 ZF 707 729
ENSCHOP00000008575 C2H2 ZF 735 757
ENSCHOP00000008575 C2H2 ZF 763 785
ENSCHOP00000008575 C2H2 ZF 791 813
ENSCHOP00000008575 C2H2 ZF 819 841

Links

Other C2H2 ZF,MADF family TFs
Other Choloepus hoffmanni TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.996
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.996
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.993
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.993
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.993
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.993
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.989
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.989
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.989
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.989
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.989
ZSCAN29 Homo sapiens ENSG00000140265 D 0.989
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.989
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.989
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.989
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.985
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.985
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.985
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.985
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.978
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.974
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.970
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.970
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.966
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.963
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.963
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.959
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.959
Zscan29 Mus musculus ENSMUSG00000050619 I 0.951
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.940
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.915
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.894
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.881
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.880
ZSCAN29 Pteropus vampyrus ENSPVAG00000008846 I 0.750
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.748
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.748
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.748
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.748
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.748
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.747
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.745
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.744
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.744
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.741
ZSCAN29 Echinops telfairi ENSETEG00000019734 I 0.735
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.733
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.732
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.731
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.731
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.731
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.731
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.731
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.731
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.731
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.731
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.728
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.725
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.724
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.724
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.716
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.715
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.707
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.701
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.701