ZKSCAN2 (Choloepus hoffmanni)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSCHOG00000013904 T076439_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.962 0.962
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.734 0.734
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.734 0.734
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.734 0.734
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000012316 MADF 249 311
ENSCHOP00000012316 MADF 403 470
ENSCHOP00000012316 C2H2 ZF 664 686
ENSCHOP00000012316 C2H2 ZF 692 714
ENSCHOP00000012316 C2H2 ZF 720 742
ENSCHOP00000012316 C2H2 ZF 748 770
ENSCHOP00000012316 C2H2 ZF 776 798
ENSCHOP00000012316 C2H2 ZF 804 826

Links

Other C2H2 ZF,MADF family TFs
Other Choloepus hoffmanni TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.970
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.970
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.969
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.969
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.969
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.969
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.969
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.966
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.966
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.966
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.966
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.958
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.958
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.958
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.954
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.954
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.954
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.951
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.950
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.943
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.943
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.936
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.935
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.931
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.921
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.920
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.864
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.852
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.730
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.728
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.726
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.726
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.724
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.724
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.724
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.724
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.724
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.724
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.720
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.720
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.720
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.720
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.720
ZSCAN29 Homo sapiens ENSG00000140265 D 0.720
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.720
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.720
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.719
ENSBTAP00000014826-D1 Bos grunniens ENSBTAP00000014826-D1 I 0.718
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.716
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.716
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.716
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.716
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.715
Zscan29 Mus musculus ENSMUSG00000050619 I 0.713
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.712
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.712
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.712
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.707
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.707