ZKSCAN2 (Callithrix jacchus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSCJAG00000020749 T076441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.992 0.992
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.752 0.752
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.752 0.752
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000002203 MADF 361 422
ENSCJAP00000002203 MADF 515 582
ENSCJAP00000002203 C2H2 ZF 775 797
ENSCJAP00000002203 C2H2 ZF 803 825
ENSCJAP00000038596 MADF 157 218
ENSCJAP00000038596 MADF 311 378
ENSCJAP00000038596 C2H2 ZF 571 593
ENSCJAP00000038596 C2H2 ZF 599 621
ENSCJAP00000038596 C2H2 ZF 627 649
ENSCJAP00000038596 C2H2 ZF 655 677
ENSCJAP00000038596 C2H2 ZF 683 705
ENSCJAP00000038596 C2H2 ZF 711 733
ENSCJAP00000038599 MADF 361 422
ENSCJAP00000038599 MADF 515 582
ENSCJAP00000038599 C2H2 ZF 775 797
ENSCJAP00000038599 C2H2 ZF 803 825
ENSCJAP00000038599 C2H2 ZF 831 853
ENSCJAP00000038599 C2H2 ZF 859 881
ENSCJAP00000038599 C2H2 ZF 887 909
ENSCJAP00000038599 C2H2 ZF 915 937

Links

Other C2H2 ZF,MADF family TFs
Other Callithrix jacchus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.994
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.992
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.992
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.989
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.989
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.989
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.989
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.989
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.985
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.985
ZKSCAN2 Otolemur garnettii ENSOGAG00000009286 N 0.982
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.981
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.981
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.977
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.977
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.973
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.973
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.962
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.958
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.958
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.954
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.954
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.950
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.939
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.929
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.924
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.906
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.879
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.859
ZKSCAN2 Pteropus vampyrus ENSPVAG00000016982 N 0.781
ZKSCAN2 Felis catus ENSFCAG00000015272 N 0.756
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.752
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.743
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.741
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.739
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.739
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.739
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.739
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.739
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.735
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.735
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.735
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.735
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.735
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.735
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.735
ZSCAN29 Homo sapiens ENSG00000140265 D 0.735
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.731
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.731
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.731
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.731
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.731
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.731
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.730
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.730
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.727
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.727
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.727
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.722
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.722
ENSBTAP00000014826-D1 Bos grunniens ENSBTAP00000014826-D1 I 0.721
Zscan29 Mus musculus ENSMUSG00000050619 I 0.720
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.714
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.701