ZSCAN29 (Cavia porcellus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSCPOG00000001782 T076442_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.911 0.911
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.911 0.911
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.911 0.911
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000001613 MADF 260 329
ENSCPOP00000001613 MADF 426 493
ENSCPOP00000001613 C2H2 ZF 679 701
ENSCPOP00000001613 C2H2 ZF 707 729
ENSCPOP00000001613 C2H2 ZF 735 757
ENSCPOP00000001613 C2H2 ZF 763 785
ENSCPOP00000001613 C2H2 ZF 791 813
ENSCPOP00000001613 C2H2 ZF 819 841

Links

Other C2H2 ZF,MADF family TFs
Other Cavia porcellus TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.922
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.922
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.919
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.919
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.919
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.919
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.919
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.919
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.919
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.918
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.915
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.915
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.915
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.915
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.911
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.911
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.911
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.911
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.911
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.911
ZSCAN29 Homo sapiens ENSG00000140265 D 0.911
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.907
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.896
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.896
Zscan29 Mus musculus ENSMUSG00000050619 I 0.896
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.896
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.896
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.893
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.893
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.889
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.874
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.859
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.852
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.822
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.720
ZSCAN29 Pteropus vampyrus ENSPVAG00000008846 I 0.715
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.714
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.714
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.714
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.714
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.714
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.714
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.711
ZSCAN29 Echinops telfairi ENSETEG00000019734 I 0.707
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.702