CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCPOG00000005222
(
Cavia porcellus
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSCPOG00000005222
T076443_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC
GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.962
0.962
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.728
0.728
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.728
0.728
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.728
0.728
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000004695
MADF
363
424
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHMLEPCAFFEDM
ENSCPOP00000004695
MADF
512
583
ILHETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDAL
ENSCPOP00000004695
C2H2 ZF
775
797
YKCSVCGKCFGRSRSLIRHQRIH
ENSCPOP00000004695
C2H2 ZF
803
825
FKCLDCGKSFNDSSNFGAHQRIH
ENSCPOP00000004695
C2H2 ZF
831
853
YRCGECGKCFSQSSSLIIHQRTH
ENSCPOP00000004695
C2H2 ZF
859
881
YQCGECGKSFTNSSHFSAHRRVH
ENSCPOP00000004695
C2H2 ZF
887
909
YKCVDCEKSFNNCTRFREHRRIH
ENSCPOP00000004695
C2H2 ZF
915
937
YGCAHCGKRFSKSSVLTKHRDVH
Links
Other
C2H2 ZF,MADF
family TFs
Other
Cavia porcellus
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000006980
Ailuropoda melanoleuca
ENSAMEG00000006980
I
0.977
ENSPPYG00000007207
Pongo abelii
ENSPPYG00000007207
I
0.973
ZKSCAN2
Pan troglodytes
ENSPTRG00000007906
I
0.973
ZKSCAN2
Homo sapiens
ENSG00000155592
D
0.973
ENSCSAG00000006472
Chlorocebus sabaeus
ENSCSAG00000006472
I
0.969
ZKSCAN2
Sus scrofa
ENSSSCG00000007823
I
0.966
ENSMICG00000001583
Microcebus murinus
ENSMICG00000001583
I
0.966
ENSSSCG00000007824
Sus scrofa
ENSSSCG00000007824
I
0.962
ZKSCAN2
Callithrix jacchus
ENSCJAG00000020749
I
0.962
ZKSCAN2
Bos taurus
ENSBTAG00000011162
I
0.962
ZKSCAN2
Canis familiaris
ENSCAFG00000017477
I
0.962
ENSNLEG00000011727
Nomascus leucogenys
ENSNLEG00000011727
I
0.958
ENSSTOG00000000417
Ictidomys tridecemlineatus
ENSSTOG00000000417
I
0.958
ZKSCAN2
Gorilla gorilla
ENSGGOG00000004769
I
0.955
ENSP00000331626
Macaca fascicularis
ENSP00000331626
I
0.951
ENSPANG00000007624
Papio anubis
ENSPANG00000007624
I
0.951
ENSOARG00000018575
Ovis aries
ENSOARG00000018575
I
0.947
ENSTSYG00000009836
Tarsius syrichta
ENSTSYG00000009836
I
0.947
ZKSCAN2
Tursiops truncatus
ENSTTRG00000015263
I
0.947
ZKSCAN2
Sorex araneus
ENSSARG00000003883
I
0.940
ZKSCAN2
Choloepus hoffmanni
ENSCHOG00000013904
I
0.936
ZKSCAN2
Loxodonta africana
ENSLAFG00000007287
I
0.936
ZKSCAN2
Dasypus novemcinctus
ENSDNOG00000044830
I
0.932
Zkscan2
Rattus norvegicus
ENSRNOG00000024245
I
0.931
ZKSCAN2
Procavia capensis
ENSPCAG00000014144
I
0.928
Zkscan2
Mus musculus
ENSMUSG00000030757
I
0.920
ZKSCAN2
Monodelphis domestica
ENSMODG00000015452
I
0.864
ENSSHAG00000013237
Sarcophilus harrisii
ENSSHAG00000013237
I
0.834
ZSCAN29
Dasypus novemcinctus
ENSDNOG00000018427
I
0.736
ZSCAN29
Felis catus
ENSFCAG00000002712
I
0.732
ZSCAN29
Pan troglodytes
ENSPTRG00000006992
I
0.732
ZSCAN29
Callithrix jacchus
ENSCJAG00000002903
I
0.728
ENSSTOG00000006892
Ictidomys tridecemlineatus
ENSSTOG00000006892
I
0.728
ZSCAN29
Tursiops truncatus
ENSTTRG00000016234
I
0.728
ZSCAN29
Equus caballus
ENSECAG00000012289
I
0.728
ENSNLEG00000004938
Nomascus leucogenys
ENSNLEG00000004938
I
0.728
ZSCAN29
Microcebus murinus
ENSMICG00000010051
I
0.728
ENSMPUG00000010249
Mustela putorius furo
ENSMPUG00000010249
I
0.728
ENSSSCG00000004709
Sus scrofa
ENSSSCG00000004709
I
0.725
ZSCAN29
Choloepus hoffmanni
ENSCHOG00000009706
I
0.725
ZSCAN29
Canis familiaris
ENSCAFG00000012056
I
0.725
ENSSHAG00000012821
Sarcophilus harrisii
ENSSHAG00000012821
I
0.725
ZSCAN29
Otolemur garnettii
ENSOGAG00000000128
I
0.725
ZSCAN29
Loxodonta africana
ENSLAFG00000001195
I
0.725
ENSAMEG00000015432
Ailuropoda melanoleuca
ENSAMEG00000015432
I
0.724
ZSCAN29
Gorilla gorilla
ENSGGOG00000002879
I
0.724
ENSPPYG00000006412
Pongo abelii
ENSPPYG00000006412
I
0.724
Myotis_brandtii_ZSCAN29_10025802
Myotis brandtii
Myotis_brandtii_ZSCAN29_10025802
I
0.721
ENSPANG00000018475
Papio anubis
ENSPANG00000018475
I
0.721
ZSCAN29
Monodelphis domestica
ENSMODG00000017820
I
0.721
ZSCAN29
Homo sapiens
ENSG00000140265
D
0.720
ENSTSYG00000004828
Tarsius syrichta
ENSTSYG00000004828
I
0.720
ENSP00000380174
Macaca fascicularis
ENSP00000380174
I
0.717
ENSCSAG00000009079
Chlorocebus sabaeus
ENSCSAG00000009079
I
0.717
ZSCAN29
Macaca mulatta
ENSMMUG00000017070
I
0.717
ENSBTAP00000014826-D1
Bos grunniens
ENSBTAP00000014826-D1
I
0.713
ENSBTAP00000014826-D2
Bos grunniens
ENSBTAP00000014826-D2
I
0.709
ZSCAN29
Bos taurus
ENSBTAG00000014478
I
0.709
Zscan29
Mus musculus
ENSMUSG00000050619
I
0.705