ENSCPOG00000005222 (Cavia porcellus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSCPOG00000005222 T076443_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.962 0.962
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.728 0.728
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.728 0.728
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.728 0.728
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000004695 MADF 363 424
ENSCPOP00000004695 MADF 512 583
ENSCPOP00000004695 C2H2 ZF 775 797
ENSCPOP00000004695 C2H2 ZF 803 825
ENSCPOP00000004695 C2H2 ZF 831 853
ENSCPOP00000004695 C2H2 ZF 859 881
ENSCPOP00000004695 C2H2 ZF 887 909
ENSCPOP00000004695 C2H2 ZF 915 937

Links

Other C2H2 ZF,MADF family TFs
Other Cavia porcellus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.977
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.973
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.973
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.973
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.969
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.966
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.966
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.962
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.962
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.962
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.962
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.958
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.958
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.955
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.951
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.951
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.947
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.947
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.947
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.940
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.936
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.936
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.932
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.931
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.928
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.920
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.864
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.834
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.736
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.732
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.732
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.728
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.728
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.728
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.728
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.728
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.728
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.728
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.725
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.725
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.725
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.725
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.725
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.725
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.724
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.724
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.724
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.721
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.721
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.721
ZSCAN29 Homo sapiens ENSG00000140265 D 0.720
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.720
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.717
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.717
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.717
ENSBTAP00000014826-D1 Bos grunniens ENSBTAP00000014826-D1 I 0.713
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.709
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.709
Zscan29 Mus musculus ENSMUSG00000050619 I 0.705