ZSCAN29 (Erinaceus europaeus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSEEUG00000006869 T076449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.936 0.936
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.936 0.936
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.936 0.936
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000006253 MADF 155 223
ENSEEUP00000006253 MADF 320 387
ENSEEUP00000006253 C2H2 ZF 573 595
ENSEEUP00000006253 C2H2 ZF 601 623
ENSEEUP00000006253 C2H2 ZF 629 651
ENSEEUP00000006253 C2H2 ZF 657 679
ENSEEUP00000006253 C2H2 ZF 685 707
ENSEEUP00000006253 C2H2 ZF 713 735

Links

Other C2H2 ZF,MADF family TFs
Other Erinaceus europaeus TFs

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58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action