ZSCAN29 (Echinops telfairi)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSETEG00000019734 T076451_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.739 0.739
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.739 0.739
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000016030 MADF 378 445
ENSETEP00000016030 C2H2 ZF 632 654
ENSETEP00000016030 C2H2 ZF 660 682
ENSETEP00000016030 C2H2 ZF 688 710
ENSETEP00000016030 C2H2 ZF 716 738
ENSETEP00000016030 C2H2 ZF 744 766
ENSETEP00000016030 C2H2 ZF 772 794

Links

Other C2H2 ZF,MADF family TFs
Other Echinops telfairi TFs

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34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action