ZSCAN29 (Homo sapiens)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSG00000140265 T076454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M01165_2.00
Homo sapiens
WAAYYCGRWT

AWYCGRRTTW
PBM
Lambert et al.(2019)
pTH11268
(Direct) (Direct)
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
(Direct) (Direct)
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
(Direct) (Direct)
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01165_2.00 MADF 52 119
M01165_2.00 MADF 215 282

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000380174 MADF 263 330
ENSP00000380174 MADF 426 493
ENSP00000380174 C2H2 ZF 678 700
ENSP00000380174 C2H2 ZF 706 728
ENSP00000380174 C2H2 ZF 734 756
ENSP00000380174 C2H2 ZF 762 784
ENSP00000380174 C2H2 ZF 790 812
ENSP00000380174 C2H2 ZF 818 840
ENSP00000456089 MADF 262 329
ENSP00000456089 MADF 425 492
ENSP00000456883 C2H2 ZF 288 310
ENSP00000456883 C2H2 ZF 316 338
ENSP00000456883 C2H2 ZF 344 366
ENSP00000456883 C2H2 ZF 372 394
ENSP00000456883 C2H2 ZF 400 422
ENSP00000456883 C2H2 ZF 428 450

Links

Other C2H2 ZF,MADF family TFs
Other Homo sapiens TFs

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71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action