ZSCAN29 (Gorilla gorilla)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSGGOG00000002879 T076456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.996 0.996
ZSCAN29
M01165_2.00
Homo sapiens
WAAYYCGRWT

AWYCGRRTTW
PBM
Lambert et al.(2019)
pTH11268
0.971 1.000
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.996 0.996
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.996 0.996
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000002830 MADF 263 330
ENSGGOP00000002830 MADF 426 493
ENSGGOP00000002830 C2H2 ZF 678 700
ENSGGOP00000002830 C2H2 ZF 706 728
ENSGGOP00000002830 C2H2 ZF 734 756
ENSGGOP00000002830 C2H2 ZF 762 784
ENSGGOP00000002830 C2H2 ZF 790 812
ENSGGOP00000002830 C2H2 ZF 818 840
ENSGGOP00000019020 MADF 332 399
ENSGGOP00000019020 MADF 495 562

Links

Other C2H2 ZF,MADF family TFs
Other Gorilla gorilla TFs

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71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action