ZKSCAN2 (Gorilla gorilla)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSGGOG00000004769 T076457_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.992 0.992
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.752 0.752
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.752 0.752
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000004672 MADF 298 359
ENSGGOP00000004672 MADF 452 519
ENSGGOP00000004672 C2H2 ZF 712 734
ENSGGOP00000004672 C2H2 ZF 740 762
ENSGGOP00000004672 C2H2 ZF 768 790
ENSGGOP00000004672 C2H2 ZF 796 818
ENSGGOP00000004672 C2H2 ZF 824 846
ENSGGOP00000004672 C2H2 ZF 852 874
ENSGGOP00000028290 MADF 359 420
ENSGGOP00000028290 MADF 513 580
ENSGGOP00000028290 C2H2 ZF 773 795

Links

Other C2H2 ZF,MADF family TFs
Other Gorilla gorilla TFs

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62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action