CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN29
(
Loxodonta africana
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSLAFG00000001195
T076458_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.981
0.981
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.981
0.981
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.981
0.981
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC
GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.731
0.731
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000001010
MADF
258
325
TEFYEALRNCHRNSQVYGAVAKRLREYGFLRTLEQCRTKFKGLQKSYRKVKSGHPPETCPFFEEMEAL
ENSLAFP00000001010
MADF
422
489
TQFYEALRNCHRNSQLYGAVAERLWEYGFLRTPEQCRTKFKSLQTSYRKVKNGQAPETCPFFEEMDAL
ENSLAFP00000001010
C2H2 ZF
674
696
YKCADCGKSFSRSARLIRHRRIH
ENSLAFP00000001010
C2H2 ZF
702
724
YKCLDCGKSFRDSSNFITHRRIH
ENSLAFP00000001010
C2H2 ZF
730
752
YQCGECGKRFNQSSSLIIHQRTH
ENSLAFP00000001010
C2H2 ZF
758
780
YQCEECGKSFNNSSHFSAHRRIH
ENSLAFP00000001010
C2H2 ZF
786
808
HVCPDCGKSFGKSSDLRAHHRTH
ENSLAFP00000001010
C2H2 ZF
814
836
YGCHACGKCFSKSSALNKHREIH
Links
Other
C2H2 ZF,MADF
family TFs
Other
Loxodonta africana
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMPUG00000010249
Mustela putorius furo
ENSMPUG00000010249
I
0.989
ZSCAN29
Callithrix jacchus
ENSCJAG00000002903
I
0.989
ZSCAN29
Canis familiaris
ENSCAFG00000012056
I
0.985
ZSCAN29
Choloepus hoffmanni
ENSCHOG00000009706
I
0.985
ZSCAN29
Gorilla gorilla
ENSGGOG00000002879
I
0.985
ENSAMEG00000015432
Ailuropoda melanoleuca
ENSAMEG00000015432
I
0.985
ENSPPYG00000006412
Pongo abelii
ENSPPYG00000006412
I
0.985
ZSCAN29
Dasypus novemcinctus
ENSDNOG00000018427
I
0.981
ZSCAN29
Equus caballus
ENSECAG00000012289
I
0.981
ZSCAN29
Pan troglodytes
ENSPTRG00000006992
I
0.981
ZSCAN29
Felis catus
ENSFCAG00000002712
I
0.981
ZSCAN29
Tursiops truncatus
ENSTTRG00000016234
I
0.981
ZSCAN29
Microcebus murinus
ENSMICG00000010051
I
0.981
ZSCAN29
Homo sapiens
ENSG00000140265
D
0.981
ENSTSYG00000004828
Tarsius syrichta
ENSTSYG00000004828
I
0.981
ENSSSCG00000004709
Sus scrofa
ENSSSCG00000004709
I
0.978
Myotis_brandtii_ZSCAN29_10025802
Myotis brandtii
Myotis_brandtii_ZSCAN29_10025802
I
0.978
ENSNLEG00000004938
Nomascus leucogenys
ENSNLEG00000004938
I
0.977
ENSSHAG00000012821
Sarcophilus harrisii
ENSSHAG00000012821
I
0.974
ZSCAN29
Otolemur garnettii
ENSOGAG00000000128
I
0.974
ENSSTOG00000006892
Ictidomys tridecemlineatus
ENSSTOG00000006892
I
0.966
ZSCAN29
Macaca mulatta
ENSMMUG00000017070
I
0.963
ENSP00000380174
Macaca fascicularis
ENSP00000380174
I
0.963
ZSCAN29
Monodelphis domestica
ENSMODG00000017820
I
0.963
ENSCSAG00000009079
Chlorocebus sabaeus
ENSCSAG00000009079
I
0.959
ENSPANG00000018475
Papio anubis
ENSPANG00000018475
I
0.959
ZSCAN29
Bos taurus
ENSBTAG00000014478
I
0.951
ENSBTAP00000014826-D2
Bos grunniens
ENSBTAP00000014826-D2
I
0.951
Zscan29
Mus musculus
ENSMUSG00000050619
I
0.948
ZSCAN29
Erinaceus europaeus
ENSEEUG00000006869
I
0.932
ZSCAN29
Cavia porcellus
ENSCPOG00000001782
I
0.907
ZSCAN29
Procavia capensis
ENSPCAG00000010380
I
0.886
ZSCAN29
Tupaia belangeri
ENSTBEG00000010257
I
0.873
Zscan29
Rattus norvegicus
ENSRNOG00000012419
I
0.872
ZKSCAN2
Pan troglodytes
ENSPTRG00000007906
I
0.748
ENSMICG00000001583
Microcebus murinus
ENSMICG00000001583
I
0.748
ZKSCAN2
Sus scrofa
ENSSSCG00000007823
I
0.748
ENSPPYG00000007207
Pongo abelii
ENSPPYG00000007207
I
0.748
ENSAMEG00000006980
Ailuropoda melanoleuca
ENSAMEG00000006980
I
0.748
ZKSCAN2
Homo sapiens
ENSG00000155592
D
0.748
ZSCAN29
Pteropus vampyrus
ENSPVAG00000008846
I
0.746
ENSSSCG00000007824
Sus scrofa
ENSSSCG00000007824
I
0.745
ENSSTOG00000000417
Ictidomys tridecemlineatus
ENSSTOG00000000417
I
0.744
ZKSCAN2
Gorilla gorilla
ENSGGOG00000004769
I
0.744
ENSCSAG00000006472
Chlorocebus sabaeus
ENSCSAG00000006472
I
0.743
ZKSCAN2
Tursiops truncatus
ENSTTRG00000015263
I
0.743
ZKSCAN2
Loxodonta africana
ENSLAFG00000007287
I
0.741
Zkscan2
Rattus norvegicus
ENSRNOG00000024245
I
0.740
ZKSCAN2
Canis familiaris
ENSCAFG00000017477
I
0.731
ZKSCAN2
Callithrix jacchus
ENSCJAG00000020749
I
0.731
ZSCAN29
Echinops telfairi
ENSETEG00000019734
I
0.731
ENSNLEG00000011727
Nomascus leucogenys
ENSNLEG00000011727
I
0.731
Zkscan2
Mus musculus
ENSMUSG00000030757
I
0.729
ENSP00000331626
Macaca fascicularis
ENSP00000331626
I
0.728
ZKSCAN2
Dasypus novemcinctus
ENSDNOG00000044830
I
0.728
ENSPANG00000007624
Papio anubis
ENSPANG00000007624
I
0.728
ENSCPOG00000005222
Cavia porcellus
ENSCPOG00000005222
I
0.725
ZKSCAN2
Monodelphis domestica
ENSMODG00000015452
I
0.725
ZKSCAN2
Sorex araneus
ENSSARG00000003883
I
0.724
ENSTSYG00000009836
Tarsius syrichta
ENSTSYG00000009836
I
0.724
ZKSCAN2
Choloepus hoffmanni
ENSCHOG00000013904
I
0.716
ENSSHAG00000013237
Sarcophilus harrisii
ENSSHAG00000013237
I
0.707
ZKSCAN2
Procavia capensis
ENSPCAG00000014144
I
0.706
ENSOARG00000018575
Ovis aries
ENSOARG00000018575
I
0.703
ZKSCAN2
Bos taurus
ENSBTAG00000011162
I
0.701