ZKSCAN2 (Loxodonta africana)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSLAFG00000007287 T076459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.962 0.962
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.745 0.745
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.745 0.745
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000006125 MADF 363 425
ENSLAFP00000006125 MADF 517 584
ENSLAFP00000006125 C2H2 ZF 777 799
ENSLAFP00000006125 C2H2 ZF 805 827
ENSLAFP00000006125 C2H2 ZF 833 855
ENSLAFP00000006125 C2H2 ZF 861 883
ENSLAFP00000006125 C2H2 ZF 889 911
ENSLAFP00000006125 C2H2 ZF 917 939

Links

Other C2H2 ZF,MADF family TFs
Other Loxodonta africana TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.970
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.969
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.969
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.966
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.966
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.966
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.966
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.966
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.966
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.966
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.966
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.962
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.958
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.958
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.958
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.958
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.954
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.954
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.947
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.947
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.939
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.936
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.935
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.931
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.931
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.924
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.864
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.848
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.749
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.745
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.745
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.745
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.745
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.741
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.741
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.741
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.741
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.739
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.738
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.738
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.737
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.735
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.735
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.735
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.735
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.734
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.731
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.731
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.731
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.731
ZSCAN29 Homo sapiens ENSG00000140265 D 0.731
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.728
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.727
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.723
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.723
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.718
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.718
Zscan29 Mus musculus ENSMUSG00000050619 I 0.716
ENSBTAP00000014826-D1 Bos grunniens ENSBTAP00000014826-D1 I 0.715
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.711
ENSOANG00000022313 Ornithorhynchus anatinus ENSOANG00000022313 I 0.707