ZSCAN29 (Monodelphis domestica)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSMODG00000017820 T076466_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.963 0.963
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.963 0.963
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.963 0.963
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000022214 MADF 310 377
ENSMODP00000022214 MADF 471 538
ENSMODP00000022214 C2H2 ZF 735 757
ENSMODP00000022214 C2H2 ZF 763 785
ENSMODP00000022214 C2H2 ZF 791 813
ENSMODP00000022214 C2H2 ZF 819 841
ENSMODP00000022214 C2H2 ZF 847 869
ENSMODP00000022214 C2H2 ZF 875 897

Links

Other C2H2 ZF,MADF family TFs
Other Monodelphis domestica TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.744
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.966
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.932
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.721
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.743
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.944
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.744
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.970
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.959
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.731
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.731
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.944
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.731
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.940
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.966
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.748
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.981
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.711
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.963
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.741
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.740
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.948
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.963
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.737
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.959
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.726
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.703
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.702
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.724
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.731
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.728
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.740
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.724
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.729
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.739
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.721
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.744
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.738
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.748
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.748
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.748
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.868
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.963
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.970
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.854
ZSCAN29 Pteropus vampyrus ENSPVAG00000008846 I 0.739
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.966
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.966
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.922
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.963
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.963
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.914
ZSCAN29 Echinops telfairi ENSETEG00000019734 I 0.728
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.963
ZSCAN29 Homo sapiens ENSG00000140265 D 0.963
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.966
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.963
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.944
Zscan29 Mus musculus ENSMUSG00000050619 I 0.925
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.955
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.864
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.963
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.963
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.932