Zkscan2 (Mus musculus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSMUSG00000030757 T076469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.947 0.947
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.733 0.733
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.733 0.733
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000041821 MADF 355 416
ENSMUSP00000041821 MADF 508 575
ENSMUSP00000041821 C2H2 ZF 768 790
ENSMUSP00000041821 C2H2 ZF 796 818
ENSMUSP00000041821 C2H2 ZF 824 846
ENSMUSP00000041821 C2H2 ZF 852 874
ENSMUSP00000041821 C2H2 ZF 880 902
ENSMUSP00000041821 C2H2 ZF 908 930

Links

Other C2H2 ZF,MADF family TFs
Other Mus musculus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HOMEZ Anolis carolinensis ENSACAG00000007379 I 0.000
HOMEZ Monodelphis domestica ENSMODG00000024443 I 0.000
HOMEZ Ornithorhynchus anatinus ENSOANG00000007642 I 0.000
Ogr08262 Ophisaurus gracilis Ogr08262 I 0.000