Zscan29 (Mus musculus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSMUSG00000050619 T076470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M01165_2.00 		Homo sapiens
WAAYYCGRWT
AWYCGRRTTW		 PBM
Lambert et al.(2019)
pTH11268 		0.967 0.962
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.948 0.948
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.948 0.948
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.948 0.948
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000078033 MADF 256 323
ENSMUSP00000078033 MADF 417 484
ENSMUSP00000106289 MADF 256 323
ENSMUSP00000106289 MADF 417 484
ENSMUSP00000106289 C2H2 ZF 665 687
ENSMUSP00000106289 C2H2 ZF 693 715
ENSMUSP00000106289 C2H2 ZF 721 743
ENSMUSP00000106289 C2H2 ZF 749 771
ENSMUSP00000106289 C2H2 ZF 777 799
ENSMUSP00000106289 C2H2 ZF 805 827
ENSMUSP00000125987 MADF 256 323
ENSMUSP00000125987 MADF 452 519
ENSMUSP00000125987 C2H2 ZF 700 722
ENSMUSP00000125987 C2H2 ZF 728 750
ENSMUSP00000125987 C2H2 ZF 756 778
ENSMUSP00000125987 C2H2 ZF 784 806
ENSMUSP00000125987 C2H2 ZF 812 834
ENSMUSP00000125987 C2H2 ZF 840 862

Links

Other C2H2 ZF,MADF family TFs
Other Mus musculus TFs

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69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action