ENSNLEG00000011727 (Nomascus leucogenys)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSNLEG00000011727 T076472_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.996 0.996
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.752 0.752
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.752 0.752
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSNLEP00000014263 MADF 361 422
ENSNLEP00000014263 MADF 515 582
ENSNLEP00000014263 C2H2 ZF 775 797
ENSNLEP00000014263 C2H2 ZF 803 825
ENSNLEP00000014263 C2H2 ZF 831 853
ENSNLEP00000014263 C2H2 ZF 859 881
ENSNLEP00000014263 C2H2 ZF 887 909
ENSNLEP00000014263 C2H2 ZF 915 937

Links

Other C2H2 ZF,MADF family TFs
Other Nomascus leucogenys TFs

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62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action