ZKSCAN2 (Procavia capensis)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSPCAG00000014144 T076481_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.913 0.913
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.709 0.709
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.709 0.709
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000013189 MADF 365 427
ENSPCAP00000013189 MADF 515 585
ENSPCAP00000013189 C2H2 ZF 778 800
ENSPCAP00000013189 C2H2 ZF 806 828
ENSPCAP00000013189 C2H2 ZF 834 856
ENSPCAP00000013189 C2H2 ZF 862 884
ENSPCAP00000013189 C2H2 ZF 890 912
ENSPCAP00000013189 C2H2 ZF 918 940

Links

Other C2H2 ZF,MADF family TFs
Other Procavia capensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.935
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.928
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.928
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.927
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.927
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.927
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.925
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.924
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.924
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.924
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.924
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.924
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.923
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.921
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.921
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.921
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.920
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.917
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.913
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.912
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.909
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.909
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.909
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.906
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.906
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.902
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.838
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.817
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.713
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.709
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.709
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.707
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.706
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.706
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.705
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.705
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.705
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.705
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.705
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.702
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.702
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.701
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.701
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.701
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.701
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.701
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.701
ZSCAN29 Homo sapiens ENSG00000140265 D 0.701
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.701