ZSCAN29 (Pteropus vampyrus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSPVAG00000008846 T076486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.746 0.746
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.746 0.746
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000008348 MADF 426 493
ENSPVAP00000008348 C2H2 ZF 680 702
ENSPVAP00000008348 C2H2 ZF 708 730
ENSPVAP00000008348 C2H2 ZF 736 758
ENSPVAP00000008348 C2H2 ZF 764 786
ENSPVAP00000008348 C2H2 ZF 792 814
ENSPVAP00000008348 C2H2 ZF 820 842

Links

Other C2H2 ZF,MADF family TFs
Other Pteropus vampyrus TFs

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34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action