ENSSHAG00000012821 (Sarcophilus harrisii)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSSHAG00000012821 T076492_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.974 0.974
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.974 0.974
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.974 0.974
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000015023 MADF 263 330
ENSSHAP00000015023 MADF 429 496
ENSSHAP00000015023 C2H2 ZF 694 716
ENSSHAP00000015023 C2H2 ZF 722 744
ENSSHAP00000015023 C2H2 ZF 750 772
ENSSHAP00000015023 C2H2 ZF 778 800
ENSSHAP00000015023 C2H2 ZF 806 828
ENSSHAP00000015023 C2H2 ZF 834 856

Links

Other C2H2 ZF,MADF family TFs
Other Sarcophilus harrisii TFs

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66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action