ZKSCAN2 (Sus scrofa)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSSSCG00000007823 T076495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.985 0.985
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.752 0.752
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.752 0.752
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000008351 MADF 363 425
ENSSSCP00000008351 MADF 517 584
ENSSSCP00000008351 C2H2 ZF 777 799
ENSSSCP00000008351 C2H2 ZF 805 827
ENSSSCP00000025889 MADF 363 424
ENSSSCP00000025889 MADF 517 584
ENSSSCP00000025889 C2H2 ZF 777 799
ENSSSCP00000025889 C2H2 ZF 805 827
ENSSSCP00000025889 C2H2 ZF 833 855
ENSSSCP00000025889 C2H2 ZF 861 883
ENSSSCP00000025889 C2H2 ZF 889 911
ENSSSCP00000025889 C2H2 ZF 917 939

Links

Other C2H2 ZF,MADF family TFs
Other Sus scrofa TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 1.000
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.992
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.989
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.989
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.985
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.985
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.985
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.985
ZKSCAN2 Otolemur garnettii ENSOGAG00000009286 N 0.982
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.981
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.977
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.977
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.977
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.977
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.973
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.973
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.969
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.969
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.969
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.966
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.966
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.958
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.950
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.947
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.935
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.935
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.927
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.870
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.844
ZKSCAN2 Pteropus vampyrus ENSPVAG00000016982 N 0.781
ZKSCAN2 Felis catus ENSFCAG00000015272 N 0.762
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.760
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.756
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.756
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.756
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.756
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.756
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.752
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.752
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.752
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.752
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.752
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.752
ZSCAN29 Homo sapiens ENSG00000140265 D 0.752
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.752
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.752
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.748
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.748
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.748
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.748
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.748
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.748
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.744
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.744
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.744
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.740
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.740
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.740
Zscan29 Mus musculus ENSMUSG00000050619 I 0.737
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.733
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.733
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.725
ENSBTAP00000014826-D1 Bos grunniens ENSBTAP00000014826-D1 I 0.725
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.714
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.710
ENSOANG00000022313 Ornithorhynchus anatinus ENSOANG00000022313 I 0.706
ZKSCAN2 Echinops telfairi ENSETEG00000013545 N 0.703
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.701