ZKSCAN2 (Sus scrofa)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSSSCG00000007823 T076495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.985 0.985
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.752 0.752
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.752 0.752
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000008351 MADF 363 425
ENSSSCP00000008351 MADF 517 584
ENSSSCP00000008351 C2H2 ZF 777 799
ENSSSCP00000008351 C2H2 ZF 805 827
ENSSSCP00000025889 MADF 363 424
ENSSSCP00000025889 MADF 517 584
ENSSSCP00000025889 C2H2 ZF 777 799
ENSSSCP00000025889 C2H2 ZF 805 827
ENSSSCP00000025889 C2H2 ZF 833 855
ENSSSCP00000025889 C2H2 ZF 861 883
ENSSSCP00000025889 C2H2 ZF 889 911
ENSSSCP00000025889 C2H2 ZF 917 939

Links

Other C2H2 ZF,MADF family TFs
Other Sus scrofa TFs

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68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action