ENSSSCG00000007824 (Sus scrofa)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSSSCG00000007824 T076496_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.981 0.981
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.749 0.749
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.749 0.749
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.749 0.749
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000008352 MADF 229 291
ENSSSCP00000008352 MADF 383 450
ENSSSCP00000008352 C2H2 ZF 643 665
ENSSSCP00000008352 C2H2 ZF 671 693
ENSSSCP00000008352 C2H2 ZF 699 721
ENSSSCP00000008352 C2H2 ZF 727 749
ENSSSCP00000008352 C2H2 ZF 755 777
ENSSSCP00000008352 C2H2 ZF 783 805
ENSSSCP00000028086 MADF 229 291
ENSSSCP00000028086 MADF 383 450
ENSSSCP00000028086 C2H2 ZF 643 665
ENSSSCP00000028086 C2H2 ZF 671 693

Links

Other C2H2 ZF,MADF family TFs
Other Sus scrofa TFs

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68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action